DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRE11 and mre11a

DIOPT Version :10

Sequence 1:NP_001427389.1 Gene:MRE11 / 4361 HGNCID:7230 Length:725 Species:Homo sapiens
Sequence 2:NP_001307188.1 Gene:mre11a / 406637 ZFINID:ZDB-GENE-040426-2638 Length:700 Species:Danio rerio


Alignment Length:726 Identity:458/726 - (63%)
Similarity:572/726 - (78%) Gaps:33/726 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     2 STADALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENK 66
            |....:|||:|||||:|||||||::||||:||||||||.|||::.|.:|||||:||||||||:||
Zfish     3 SAGSTVDDEDTFKILIATDIHLGYLEKDAIRGNDTFVTFDEIMKQAMQNEVDFVLLGGDLFHDNK 67

Human    67 PSRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDD 131
            |||||:|:|:|::|||||||||:.|||:|||:|||..|:||||||.|.|||||||:||:||||||
Zfish    68 PSRKTMHSCMEVMRKYCMGDRPIIFEIISDQAVNFSHSRFPWVNYLDDNLNISIPIFSVHGNHDD 132

Human   132 PTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNK 196
            |||:|.|||:|:|||||.|||||||.||||::|||||||||.|:||||||||||||||||||||.
Zfish   133 PTGSDGLCAVDLLSCAGLVNHFGRSRSVEKVEISPVLLQKGDTRIALYGLGSIPDERLYRMFVNN 197

Human   197 KVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEHECKIAPTKNEQQLF 261
            :||||||:|||:.|||||||||||||||:||:|||||||||:|||:|||||||||||.:||||||
Zfish   198 QVTMLRPREDEDGWFNLFVIHQNRSKHGATNYIPEQFLDDFLDLVVWGHEHECKIAPVRNEQQLF 262

Human   262 YISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLANHPDIFNPDNP 326
            |::||||||:||||||||||||:||||:||:|||:.||||.||||||::|:||:::|::|:|:.|
Zfish   263 YVTQPGSSVITSLSPGEAVKKHIGLLRVKGKKMNLQKIPLQTVRQFFIQDVVLSDYPELFSPEQP 327

Human   327 KVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVAN 391
            .....:|:||.||:|||||.||||||||...|||||:|||||||||||.|:.:||||||||:|||
Zfish   328 NTMLKVQAFCQEKVEEMLEEAERERLGNPQIPEKPLIRLRVDYSGGFEVFNTMRFSQKFVDKVAN 392

Human   392 PKDIIHFFRHREQKEK-TGEEINFGKLITKP-SEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGM 454
            ||||:||.||||.|.. ..|:::|..|.::| ||...||||||||:||||||||||||||||:||
Zfish   393 PKDILHFVRHRETKGNIKDEDVDFEALFSRPTSEVLQLRVEDLVKEYFQTAEKNVQLSLLTEQGM 457

Human   455 GEAVQEFVDKEEKDAIEELVKYQLEKTQRFLKERHIDALEDKIDEEVRRFRETRQKNTNEEDDEV 519
            |:||||||||||:||||||:.||||||||:|:||.:||.|:|||||:|:||::: :||.|||:||
Zfish   458 GKAVQEFVDKEERDAIEELINYQLEKTQRYLRERRVDATEEKIDEEIRQFRDSK-RNTAEEDEEV 521

Human   520 REAMTRARALRSQSEESASAFSADDLMSIDLAEQMANDSDDSISAATNKGRGRGRGRRGGRGQNS 584
            :||:.||:|.|.:.|.:..    |||...|....:|.:||:..|:|. ..||||||.||||...:
Zfish   522 QEAIIRAKAHRDRGETARD----DDLGLSDDPADIAMESDEEPSSAP-PVRGRGRGSRGGRDPCA 581

Human   585 ASRGGSQRGRADTGLETSTRSRNSKTAVSAS-RNMSIIDAFKSTRQQPSRNVTTKNYSEVIEVDE 648
                 |:||||......|.|....:.::|:. :..||:|.|:...|:.:|..|.|:|:|.|.:::
Zfish   582 -----SKRGRARGAASRSGRGGRGRGSLSSPVKTKSIMDVFQDVSQRSTRGKTPKSYAEEITIED 641

Human   649 SDVEEDI-FPTTSKTDQRKGDLLEDYRDTSGFGRKWSSTSSSKIMSQSQVSKGVDF-ESSEDDDD 711
            ||.:||: |..:|:|.|                 |..|.|.||..||||..|||.. |.|.:|:.
Zfish   642 SDSDEDVSFLKSSRTKQ-----------------KLPSLSDSKRASQSQSLKGVCIDEDSGEDEF 689

Human   712 DPFMNTSSLRR 722
            |||..:...||
Zfish   690 DPFKGSRKQRR 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRE11NP_001427389.1 None
mre11aNP_001307188.1 mre11 11..403 CDD:273153 300/391 (77%)

Return to query results.
Submit another query.