DRSC/TRiP Functional Genomics Resources

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Protein Alignment MRE11 and mre-11

DIOPT Version :10

Sequence 1:NP_001427389.1 Gene:MRE11 / 4361 HGNCID:7230 Length:725 Species:Homo sapiens
Sequence 2:NP_505736.2 Gene:mre-11 / 179488 WormBaseID:WBGene00003405 Length:728 Species:Caenorhabditis elegans


Alignment Length:687 Identity:250/687 - (36%)
Similarity:371/687 - (54%) Gaps:96/687 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTL 72
            :.|:..|||||||||.|:.|..|....|...|.:|:|::|.|.:||.|||||||||||.|||:..
 Worm    61 ESEDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDLFHENNPSREVQ 125

Human    73 HTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADA 137
            |...:|||:||:...|:..|.|||.||||..|.|..|||.|.|||:.:|:|:|||||||.:| ..
 Worm   126 HRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLPIFTIHGNHDDLSG-KG 189

Human   138 LCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVNKKVTMLR 202
            |.|||:|..:|.||.||:..::::..:||:||:||.|::||||:||..|:||.|.|.|..::.||
 Worm   190 LTALDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRLVRAFKNNSISFLR 254

Human   203 PKEDENSWFNLFVIHQNRSK---HGST-NFIPEQFLDDFIDLVIWGHEHECK-----IAPTKNEQ 258
            |......||||||:||||.:   |.|| ||:||..:..|.||:|||||||||     :|.::...
 Worm   255 PNAGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDLLIWGHEHECKPDPQYVASSEAVG 319

Human   259 QLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLANHP----D 319
            ..|||.||||:|.|||:|.||::|:..|::|||||.....|||.|||....::::|...|    .
 Worm   320 DGFYILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLDKIPPGSRP 384

Human   320 IFNPDNPKVTQA--IQSFCLE-KIEEMLENAERERLGNSHQPEKPLVRLRVDYSG---GFEPFSV 378
            |...|.||.|..  |....:| ||.||:..|:.:|  ...|||.||:||:|.|.|   ...|.:.
 Worm   385 ILKTDRPKHTDGRYIDEIAIEAKINEMITTAKAKR--RPRQPELPLIRLKVIYDGDWLNITPANA 447

Human   379 LRFSQKFVDRVANPKDIIHFFRHREQKE---KTGEEINFGKLITKPSEGTTLRVEDLVKQYFQTA 440
            .|...::.:.|||..|::...::.:.||   :|..|.|..::..:..:.:...::.::..||...
 Worm   448 KRIGLRYENVVANAVDMVFIKKNNKPKEGKLQTENEKNITEMADEMGQVSATNLQTIINDYFINQ 512

Human   441 EKNVQLSLLTERGMGEAVQEFVDKEEKDAIEE-------------LVKYQLEKTQRFLKERHIDA 492
            ....|:::|...|:|.|::::      .||||             .:.:|::..::.||:..:..
 Worm   513 PLVDQMTVLKPIGIGRALEQY------SAIEEGGLATSANRNFDSCLMHQIDVVRKTLKKMPLPP 571

Human   493 LEDKIDEEVRRFRE--------------TRQKN------TNEEDDEVREAMTRARALRSQSEESA 537
            :.|..|  :.:||:              .|.||      ..|::|:.:..|..    :|.|..:.
 Worm   572 INDPSD--LDKFRDLITKDLYDMKKADSERFKNPVADVEMEEDEDDPQYYMPP----QSTSRTNY 630

Human   538 SAFSADDLMSIDLAEQMANDSDDSISAATNK--GRGRGRGRRGGRGQNSASRGGSQR----GRAD 596
            ::.|.|::.:.|  |:|.:    |||..:.:  .||||||.||.......:||.|.:    .:.|
 Worm   631 ASGSEDEVANSD--EEMGS----SISRHSKQPTTRGRGRGARGAGASRETTRGRSNKVVSTRQID 689

Human   597 T-GLE------------TSTRSR-NSKTAVSASRNMS 619
            : |.|            .|||.: ..|:|.|..|::|
 Worm   690 SDGFEIINDSPSPPPASRSTRGKARGKSAPSKKRDLS 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRE11NP_001427389.1 None
mre-11NP_505736.2 mre11 63..472 CDD:273153 189/411 (46%)

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