DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS18C and mrps18a

DIOPT Version :10

Sequence 1:NP_524593.1 Gene:mRpS18C / 43609 FlyBaseID:FBgn0039765 Length:140 Species:Drosophila melanogaster
Sequence 2:NP_001025285.2 Gene:mrps18a / 558080 ZFINID:ZDB-GENE-041210-109 Length:210 Species:Danio rerio


Alignment Length:111 Identity:29/111 - (26%)
Similarity:45/111 - (40%) Gaps:33/111 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PESSDLDLPI---DIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGRIYGRHITGLCKR 95
            |.:.....||   :::|.|                :|.:|.|||||... .|.:..|.|||||.:
Zfish    75 PPNPTASCPIYRWNLQNKY----------------NYTDVLLLSQFIRS-DGGLLPRRITGLCAQ 122

  Fly    96 RQEQVEQAILRAQQCLLMPGYHKDLDFLQDPKLFDPERPV---RPH 138
            ...::...:..|.:..|:|.:.        |:|  ||..|   :||
Zfish   123 EHNKIAICVQMAHRAGLLPDHR--------PRL--PEGHVLKPKPH 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS18CNP_524593.1 Ribosomal_S18 63..113 CDD:460054 15/49 (31%)
mrps18aNP_001025285.2 None

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