DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment heca and Heca

DIOPT Version :10

Sequence 1:NP_788768.1 Gene:heca / 43604 FlyBaseID:FBgn0010113 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_001028604.1 Gene:Heca / 380629 MGIID:2685715 Length:544 Species:Mus musculus


Alignment Length:678 Identity:186/678 - (27%)
Similarity:267/678 - (39%) Gaps:198/678 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RRNSNISSSGNSTQQQHQQQLQQQHQTQQHQLLQFYAENVNSSGVLMAPMQ----------GTGG 58
            |:|...:|||:            :.:.....|....|....:.|.|.|...          ||||
Mouse    11 RKNKRANSSGD------------EQENGAGALAAAGATGAAAGGALAAAAAGCGAASPGAVGTGG 63

  Fly    59 VGGVGGGG-------MVHCCLPSGDC---------------RKLDTLIHLNELSLADCIRVLCNN 101
            ..|.||.|       :......:||.               |.:|       |...|..:|:|||
Mouse    64 AAGPGGAGTGAANATVAAGAAAAGDAKNGAPCATPLICSFGRPVD-------LEKDDYQKVVCNN 121

  Fly   102 ENCSAGQYMHRECFEWWEASVLQALKANGRARSWSERQRLQHLWTKKGYELVQKACSCKCGRGQL 166
            |:|....:||.:||..||:|:|......||||||:|:|..|::||||||:|..:.|||:||:|.|
Mouse   122 EHCPCSTWMHLQCFYEWESSILVQFNCIGRARSWNEKQCRQNMWTKKGYDLAFRFCSCRCGQGHL 186

  Fly   167 RKDLDWVPPSSQGVIYLNGSGNRPTLANGSLSEDDDKKKAKKKRNRNNNNNNGGGGGGGAGVNGN 231
            :||.||......                    :|:.|||                    :|...|
Mouse   187 KKDTDWYQVKRM--------------------QDEKKKK--------------------SGSEKN 211

  Fly   232 TKTPLSNNNGNSYAGLTPN-PNVGVIGSGLPHNNGNTASNGSSGNNGSSGVLQTSALATFSNILN 295
            |..|.......:..|...| |..| :...||..:.....|......||                 
Mouse   212 TARPPGEAGEEAKKGRALNKPQKG-LNHDLPRRHSMDRQNSQEKTVGS----------------- 258

  Fly   296 TNNVLGLDLRARAGSLSSSGAGSGSTSPSDSQSSGEISVSPVQQLLPQQQQQQQQSLLIQPLGPA 360
                            ::.||.|...||..|..:|...:||.....|:..:.         ||  
Mouse   259 ----------------AAYGARSPCGSPGQSPPTGYSILSPAHFSGPRSSRY---------LG-- 296

  Fly   361 FGSNLLQNGLGLSKNLLIAPQQQQQQQLQQQQQQQNNLPALANISNFKPLASYEQQQLVQQQKNK 425
               ..|:|.:.|                   :..:..:|......|    |.::           
Mouse   297 ---EFLKNAIHL-------------------EPHKKAVPGGHVFRN----AHFD----------- 324

  Fly   426 EVELYSDRVRSTSGCNGI-----FSRRLDFSS-FNLLPKTRLNSYQVKIEDEGNHG-NDETRLFI 483
                ||....|.......     |.||||.|. ...:|:.:||::.|::||:...| .::.|.||
Mouse   325 ----YSSAGLSVHRAGHFDTPVQFLRRLDLSELLTHIPRHKLNTFHVRMEDDAQVGQGEDLRKFI 385

  Fly   484 LSSLAQSQMSRVACILCEEPLLVFDRYPLVDGSFFLSPKQHSSGCIEVKY------EGRTLYLTC 542
            |::|:.|..:.|.|.||...|.||:::|||||:.||||.:|.    |::|      :||.::|..
Mouse   386 LAALSASHRNVVNCALCHRALPVFEQFPLVDGTLFLSPSRHD----EIEYDVPCHLQGRLMHLYA 446

  Fly   543 VCMSCLDGTSSSRAINCRFCKEPWDGSSLVLGTMYAYDIFAAMPCCAERFKCNNCFKMLMHPQQR 607
            ||:.||:|.   ..|.|..||..||||...|||||.|||.||.|||..|..|.:|.|.::..:..
Mouse   447 VCVDCLEGV---HKIICIKCKSRWDGSWHQLGTMYTYDILAASPCCQARLNCKHCGKPVIDVRIG 508

  Fly   608 LSFYSDYSHGVTCPYCNTQDTHFVKPLT 635
            :.::|:||:...||:|...|.|||||.:
Mouse   509 MQYFSEYSNVQQCPHCGNLDYHFVKPFS 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecaNP_788768.1 HECA 70..172 CDD:464667 45/116 (39%)
Headcase 436..634 CDD:464967 83/210 (40%)
HecaNP_001028604.1 HECA 95..192 CDD:464667 43/103 (42%)
Headcase 341..536 CDD:464967 83/201 (41%)

Return to query results.
Submit another query.