DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9733 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_651784.2 Gene:CG9733 / 43601 FlyBaseID:FBgn0039759 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:302 Identity:91/302 - (30%)
Similarity:137/302 - (45%) Gaps:42/302 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 SFGNQPATSRTPFRKSSTSDGSSLLPQPPSCGG-----VGIRNRIYDGQDTDVNEFPWMVLLEYR 182
            |.||............:..|..::|.|  .||.     .....||..|...:..::||.|.|:. 
  Rat   144 SSGNLEIAPSNEITSLTDQDTENVLTQ--ECGARPDLITLSEERIIGGTQAETGDWPWQVSLQL- 205

  Fly   183 RRSGNGLSTACAGSLINRRYVLTAAHCLTGRIEREVGTLVSVRLGEHDTRTAVDCPPGGGSCSPE 247
                |.:. .|.|:||:..:|||||||.......:..|...                |..:.||.
  Rat   206 ----NNVH-HCGGTLISNLWVLTAAHCFRSYSNPQQWTATF----------------GVSTISPR 249

  Fly   248 VQRLGFEEIRVHERYSEKASNQVHDIGLIRMERNVRYSDNIQPICLPSSVGLESRQSGQQFTVAG 312
            : |:....|..|..|:  :..:.:||.:::::|.|.::.||..:|||::.  ::........|.|
  Rat   250 L-RVRVRAILAHAEYN--SITRDNDIAVVQLDRPVTFTRNIHRVCLPAAT--QNIIPDSVAYVTG 309

  Fly   313 WGRTLKMARSAVK--QKVTVNYVDPAKCRQRFSQIKVNLEPTQLCAGGQF-RKDSCDGDSGGPLM 374
            || :|....:.|.  |:..|..|....|.:. :....::.|..||||.:. ..|:|.|||||||:
  Rat   310 WG-SLTYGGNTVTNLQQGEVRIVSSEVCNEP-AGYGGSVLPGMLCAGVRSGAVDACQGDSGGPLV 372

  Fly   375 RFRD--ESWVLEGIVSFGYKCGLKDWPGVYTNVAAYDIWIRQ 414
            : .|  ..|.:.||||:||:|||.:.|||||.|.||..||||
  Rat   373 Q-EDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTAYRNWIRQ 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9733NP_651784.2 CLIP 25..78 CDD:463440
Tryp_SPc 162..415 CDD:238113 82/258 (32%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 82/258 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.