DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9737 and tmprss4

DIOPT Version :10

Sequence 1:NP_651783.1 Gene:CG9737 / 43600 FlyBaseID:FBgn0039758 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_012822151.1 Gene:tmprss4 / 733869 XenbaseID:XB-GENE-940762 Length:785 Species:Xenopus tropicalis


Alignment Length:283 Identity:87/283 - (30%)
Similarity:134/283 - (47%) Gaps:54/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 CG---KQVTNRIYGGEIAELDEFPWLALLVYNSNDYGCSGALIDDRHILTAAHCV-QGEGVRDRQ 202
            ||   ||  .||.||..:::.::||...|.| ...:.|.|::::.|.||.||||. :|:...||.
 Frog   543 CGTGHKQ--ERIIGGSNSDILKYPWQVSLQY-MGQHICGGSILNSRWILCAAHCFDRGQRQVDRW 604

  Fly   203 GLKHVRLGEFNVKTEPDCIEEPNYLSCADAALDIAYEKIHVHPEYKEFSNYKYNDIAIIRLKHPV 267
               .|:.|          |....||      .....:||.::.:|  .::.|.||||:::||..:
 Frog   605 ---RVQYG----------ITTLTYL------FGTFVDKIFLNSKY--VTDQKPNDIALLQLKSDI 648

  Fly   268 SFTHFVMPICLPNKSEPLTLAEGQMFSVSGWGRTDLFNKYFINIHSPIKL-----KLRIPYVSNE 327
            ..:..|.|:|||.....|.:  |.:..|:|||.|         :.....|     ::.|..:|:.
 Frog   649 VASASVQPVCLPGYDNNLVV--GAVLYVTGWGHT---------VEGGAALASQLQEVAISLISST 702

  Fly   328 NCTKILEGFGVRLGPKQICAG---GEFAKDTCAGDSGGPLMYFDRQHSRWVAYGVVSYGFTQCGM 389
            .|.   :.:|.::....:|||   |  ..|||.|||||||:... |.|.|...|:||:| ..||.
 Frog   703 TCN---QEYGGQILDTMLCAGKIAG--GADTCQGDSGGPLVSLG-QSSHWEQVGIVSWG-DGCGR 760

  Fly   390 AGKPAVYTNVAEYTDWIDSVVQQ 412
            ..:..|||:|..:.:||..|::|
 Frog   761 PNRVGVYTDVQSFLNWIYGVMKQ 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9737NP_651783.1 CLIP 28..89 CDD:463440
Tryp_SPc 149..406 CDD:214473 79/265 (30%)
tmprss4XP_012822151.1 PHA03247 <32..358 CDD:223021
LDLa 402..434 CDD:238060
SRCR_2 453..545 CDD:470597 1/1 (100%)
Tryp_SPc 551..777 CDD:214473 79/265 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.