DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9743 and Scd2

DIOPT Version :9

Sequence 1:NP_651781.1 Gene:CG9743 / 43593 FlyBaseID:FBgn0039756 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_114029.1 Gene:Scd2 / 83792 RGDID:621177 Length:358 Species:Rattus norvegicus


Alignment Length:348 Identity:160/348 - (45%)
Similarity:207/348 - (59%) Gaps:25/348 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NGGE-LKHRGHATDATSHTLVKDDDNLGYKEENAVYKEQQLLQQQDQTLKEAEQVEEEEEYHPQI 101
            |||| .:...|...|.....:|||          :|         |.:.::.|....:.||    
  Rat    29 NGGEKFEKNPHHWGADVRPEIKDD----------LY---------DPSYQDEEGPPPKLEY---- 70

  Fly   102 RWPDLGAQAFLHIGALYGLYQLFYANFYTFLWVVVTVWVSGIGITAGAHRLWSHKSYTASLPLRI 166
            .|.::...|.||||||||:..:.....||.|:..:...:|.:||||||||||||::|.|.||||:
  Rat    71 VWRNIILMALLHIGALYGITLVPSCKVYTCLFAYLYYVISALGITAGAHRLWSHRTYKARLPLRL 135

  Fly   167 LLAFAFSIAGQRDAYTWALDHRIHHKFSETDADPHNAKRGFFFAHVGWLFLTPHPKVVAKRKVID 231
            .|..|.::|.|.|.|.||.|||.|||||||.|||||::|||||:|||||.:..||.|..|...:|
  Rat   136 FLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLD 200

  Fly   232 MSDLEADAVCMFQRKYYIPLFALCSIILPVAVPWYFWNEDLWMSFWINFNMRFTWTLNVAFFVNS 296
            ||||:|:.:.||||:||.|...|...|||..||||.|.|....|..::..:|:...||..:.|||
  Rat   201 MSDLKAEKLVMFQRRYYKPGLLLMCFILPTLVPWYCWGETFVNSLCVSTFLRYAVVLNATWLVNS 265

  Fly   297 VAHMYGNKPYDKNLMSTEAPIVSLLAMGEGWHNYHHVFPWDYKTGEFGNYSLNITTGFIDFCAWL 361
            .||:||.:|||||:.|.|..:||:.|:|||:|||||.||:||...|: .:.:|.||.|||..|.|
  Rat   266 AAHLYGYRPYDKNISSRENILVSMGAVGEGFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMALL 329

  Fly   362 GLAKGRKSVSPDMVLRRAKKCGD 384
            |||..||.||...||.|.|:.|:
  Rat   330 GLAYDRKRVSKAAVLARIKRTGE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9743NP_651781.1 Delta9-FADS-like 130..368 CDD:239582 126/237 (53%)
FA_desaturase 131..335 CDD:278890 109/203 (54%)
Scd2NP_114029.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..43 5/13 (38%)
Delta9-FADS-like 99..336 CDD:239582 126/237 (53%)
FA_desaturase 101..305 CDD:278890 110/203 (54%)
Histidine box-1. /evidence=ECO:0000305 119..124 4/4 (100%)
Histidine box-2. /evidence=ECO:0000305 156..160 2/3 (67%)
Histidine box-3. /evidence=ECO:0000305 297..301 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I10831
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X207
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.930

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