DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9743 and AT3G15870

DIOPT Version :9

Sequence 1:NP_651781.1 Gene:CG9743 / 43593 FlyBaseID:FBgn0039756 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_188208.4 Gene:AT3G15870 / 820830 AraportID:AT3G15870 Length:361 Species:Arabidopsis thaliana


Alignment Length:366 Identity:97/366 - (26%)
Similarity:156/366 - (42%) Gaps:69/366 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SLDRNGNRSAAIVPNGGELKHRGHATDATSHTLVKDDDNLGYKEENAVYKEQQLLQQQ-DQTLKE 87
            :||.:...::.....||.:.||       .||:|            |||:....::.. .:.|.|
plant    31 TLDTHNFTNSFWSKRGGSVSHR-------KHTVV------------AVYEAPDHVESSWRRLLSE 76

  Fly    88 AEQVEEEEEYHPQIRWPDLGAQAFL-----HIGALYGLYQLFYANFYTFLWVVVTVWVSGIGITA 147
            ...|..:..:..: .|........:     |:.:|...:...:..|:.|.|:   |:::||.||.
plant    77 VVVVRTKRSFWER-SWTSWDVSKLVIFVGTHLLSLLAPFYFSWEAFWVFPWL---VFINGICITL 137

  Fly   148 GAHRLWSHKSYTASLPLRILLAFAFSIAGQRDAYTWALDHRIHHKFSETDADPHNAKRGFFFAHV 212
            ..||..||:|:.....|..|.|:...:|.|.|...|..:||.|||..||..|||:..:||:|:|:
plant   138 SYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCETQRDPHSPTQGFWFSHM 202

  Fly   213 GWLFLTPHPKVVAKRKVID-------MSDLEADAVCMFQRK-------YYIPLFALCSIILPVAV 263
            .|:|.|        ..:::       :.||.......|.::       .|..||..|.     .:
plant   203 AWIFDT--------SSILENCGGEENVDDLVRQPFYRFLQRTVLLHMMAYSFLFYFCG-----GM 254

  Fly   264 PWYFWNEDLWMSFWINFNMRFTWTLNVAFFVNSVAHMYGNKPYDKNLMSTEAPIVSLLAMGEGWH 328
            |...|      ...|...:|    |::.|.||||.|::|.:.::.:..|.....|::|.:|||||
plant   255 PLLVW------GIGITIAVR----LHLTFLVNSVCHIWGTRAWNTSDFSKNNWWVAILTLGEGWH 309

  Fly   329 NYHHVFPWDYKTG-EFGNYSLNITTGFIDFCAWLGLAKGRK 368
            |.||.|.:..:.| |:  :.|:||...|.|...:|||...|
plant   310 NNHHAFEFSARHGLEW--WQLDITWCLIRFLEAIGLATNVK 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9743NP_651781.1 Delta9-FADS-like 130..368 CDD:239582 77/252 (31%)
FA_desaturase 131..335 CDD:278890 66/217 (30%)
AT3G15870NP_188208.4 Membrane-FADS-like 78..361 CDD:294412 83/300 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 124 1.000 Domainoid score I1803
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I1806
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D971318at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1155
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.840

Return to query results.
Submit another query.