DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9743 and scd

DIOPT Version :9

Sequence 1:NP_651781.1 Gene:CG9743 / 43593 FlyBaseID:FBgn0039756 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001027500.1 Gene:scd / 613092 XenbaseID:XB-GENE-988226 Length:338 Species:Xenopus tropicalis


Alignment Length:330 Identity:155/330 - (46%)
Similarity:210/330 - (63%) Gaps:25/330 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 QQDQTLKEAEQVEEEE--------------------EYHPQIR--WPDLGAQAFLHIGALYGLYQ 122
            |...|:.|:..:.::|                    ::.|.|:  |.::...|.||.||.|||:.
 Frog     7 QTVSTVMESPSIIQDEIGADRVMTDDIFDTTYIKKVDFKPPIKLVWRNVILMALLHFGAFYGLFM 71

  Fly   123 LFYANFYTFLWVVVTVWVSGIGITAGAHRLWSHKSYTASLPLRILLAFAFSIAGQRDAYTWALDH 187
            :..|...|..|.::...:|.:|:||||||||||:||.|.|||||.||...|:|.|.|.|.||.||
 Frog    72 IPAAKPITLAWAILCFMLSALGVTAGAHRLWSHRSYKAKLPLRIFLAVVNSMAFQNDIYEWARDH 136

  Fly   188 RIHHKFSETDADPHNAKRGFFFAHVGWLFLTPHPKVVAKRKVIDMSDLEADAVCMFQRK-YYIPL 251
            |:|||:||||||||||.|||||:|:|||.:..||.|:.|.|.:|:|||:||.|.||||: |.:.:
 Frog   137 RVHHKYSETDADPHNAVRGFFFSHIGWLLMRKHPDVIEKGKKLDLSDLKADKVVMFQRRNYKLSI 201

  Fly   252 FALCSIILPVAVPWYFWNEDLWMSFWINFNMRFTWTLNVAFFVNSVAHMYGNKPYDKNLMSTEAP 316
            ..:| .|||..:|||||:|...::|::...:|:...||..:.|||.||||||:|||:.:...|.|
 Frog   202 LVMC-FILPTVIPWYFWDESFSVAFYVPCLLRYALVLNATWLVNSAAHMYGNRPYDQTINPRENP 265

  Fly   317 IVSLLAMGEGWHNYHHVFPWDYKTGEFGNYSLNITTGFIDFCAWLGLAKGRKSVSPDMVLRRAKK 381
            :|::.|:|||:|||||.||:||.|.||| ...||||||||....||||...|.||.:.::.|.|:
 Frog   266 LVAIGAIGEGFHNYHHTFPFDYSTSEFG-LKFNITTGFIDLMCLLGLANDCKRVSKETIMARKKR 329

  Fly   382 CGDGT 386
            .|||:
 Frog   330 TGDGS 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9743NP_651781.1 Delta9-FADS-like 130..368 CDD:239582 131/238 (55%)
FA_desaturase 131..335 CDD:278890 110/204 (54%)
scdNP_001027500.1 Delta9-FADS-like 76..316 CDD:239582 131/241 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11153
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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