DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9743 and Scd4

DIOPT Version :10

Sequence 1:NP_651781.1 Gene:CG9743 / 43593 FlyBaseID:FBgn0039756 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_574671.7 Gene:Scd4 / 499358 RGDID:1563648 Length:381 Species:Rattus norvegicus


Alignment Length:387 Identity:165/387 - (42%)
Similarity:230/387 - (59%) Gaps:27/387 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSSPIPGQKQATSVGHCNGSCSLDRNGNRSAAIVPNGGELKHR-GHATDATSHTLVKDDDNLGYK 66
            ||:...|.|..||               :..|::|.  |:..: |..|...||:....|.     
  Rat    15 LSAFTTGPKLPTS---------------KMTALLPR--EISSKCGTTTIVDSHSWRHQDG----- 57

  Fly    67 EENAVYKEQQLLQQQDQTLKEAEQVEEEEEYHPQIR--WPDLGAQAFLHIGALYGLYQLFYANFY 129
            ||...::.:.:..:..:.:.: ...::||...|::.  |.::...|.||:|||||:..:.....|
  Rat    58 EETIPFQSEDIRPEMREDIHD-PSYQDEEGPPPKLEYVWRNIIFMALLHVGALYGITLVPSCKVY 121

  Fly   130 TFLWVVVTVWVSGIGITAGAHRLWSHKSYTASLPLRILLAFAFSIAGQRDAYTWALDHRIHHKFS 194
            |:|..:....|:|:||||||||||||::|.|.||||:.|..|.::|.|.|.|.||.|||.|||||
  Rat   122 TWLLGIFYNIVAGLGITAGAHRLWSHRTYKARLPLRLFLIMANTMAFQNDVYEWARDHRAHHKFS 186

  Fly   195 ETDADPHNAKRGFFFAHVGWLFLTPHPKVVAKRKVIDMSDLEADAVCMFQRKYYIPLFALCSIIL 259
            ||.|||||::|||||:|||||.:..||.|..|...:|||||:|:.:.||||:||.....|..|.|
  Rat   187 ETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKLAVTLIFITL 251

  Fly   260 PVAVPWYFWNEDLWMSFWINFNMRFTWTLNVAFFVNSVAHMYGNKPYDKNLMSTEAPIVSLLAMG 324
            |..||||||.|.|..|..::..:|:...||..:.|||.||:||::|||:::.:.|.|:||:.::|
  Rat   252 PTMVPWYFWGETLRHSLCVSTFLRYAVLLNFTWLVNSAAHLYGHQPYDRSIGARENPLVSVASLG 316

  Fly   325 EGWHNYHHVFPWDYKTGEFGNYSLNITTGFIDFCAWLGLAKGRKSVSPDMVLRRAKKCGDGT 386
            ||:|||||.||:||...|: .:.:|.||.|||..|.||||..||.||...||.|.|:.|||:
  Rat   317 EGFHNYHHAFPYDYSVSEY-RWHINFTTFFIDCMAALGLAYDRKRVSKAAVLARVKRTGDGS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9743NP_651781.1 Delta9-FADS-like 130..368 CDD:239582 125/237 (53%)
Scd4XP_574671.7 OLE1 85..368 CDD:441008 142/283 (50%)

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