DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9747 and Scd4

DIOPT Version :9

Sequence 1:NP_001287604.1 Gene:CG9747 / 43591 FlyBaseID:FBgn0039754 Length:461 Species:Drosophila melanogaster
Sequence 2:XP_574671.7 Gene:Scd4 / 499358 RGDID:1563648 Length:381 Species:Rattus norvegicus


Alignment Length:418 Identity:164/418 - (39%)
Similarity:225/418 - (53%) Gaps:59/418 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGHLSTSERVCSKTPAIATDSSPPLVARRSKFPNGDAQQQVRRGEDSSPELPPRGKLQLPPKREE 65
            |.|||          ::|.||.|.|    |.|..|             |:||......|      
  Rat     1 MLHLS----------SVAADSDPAL----SAFTTG-------------PKLPTSKMTAL------ 32

  Fly    66 LPRSVVPK-----EIANH----------VPKDAIDLEEYTRTFVGDRVLGWQFQAPLK----WDK 111
            |||.:..|     .:.:|          :|..:.|:....|..:.|.....:...|.|    |..
  Rat    33 LPREISSKCGTTTIVDSHSWRHQDGEETIPFQSEDIRPEMREDIHDPSYQDEEGPPPKLEYVWRN 97

  Fly   112 VIQISLLHIVA--GICLLTYPLRELNPYTTIWSFFVGGVAGFGVTAGAHRFWTHKSYKANTVLRS 174
            :|.::|||:.|  ||.|:.    ....||.:...|...|||.|:||||||.|:|::|||...||.
  Rat    98 IIFMALLHVGALYGITLVP----SCKVYTWLLGIFYNIVAGLGITAGAHRLWSHRTYKARLPLRL 158

  Fly   175 ILMVCYCVAGQNTLYDWVRDHRVHHKYSETDADPHNANRGFFFSHVGWLMMLKHPEVLRRGRQID 239
            .|::...:|.||.:|:|.||||.|||:|||.|||||:.|||||||||||::.|||.|..:|.::|
  Rat   159 FLIMANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLD 223

  Fly   240 MSDILADPVVRFHQKYFIPLKTFFCFILPTVIPVYCWGETWTLAFIQQCLFRYVSSLNFTWSVNS 304
            |||:.|:.:|.|.::|:....|.....|||::|.|.||||...:.......||...|||||.|||
  Rat   224 MSDLKAEKLVMFQRRYYKLAVTLIFITLPTMVPWYFWGETLRHSLCVSTFLRYAVLLNFTWLVNS 288

  Fly   305 AAHLWGSRPYDKRIMPSENIYVSLLAMGEGWHNYHHVFPWDYKAAELGNYTVNFTTMVLDAFHKL 369
            ||||:|.:|||:.|...||..||:.::|||:|||||.||:||..:|. .:.:||||..:|....|
  Rat   289 AAHLYGHQPYDRSIGARENPLVSVASLGEGFHNYHHAFPYDYSVSEY-RWHINFTTFFIDCMAAL 352

  Fly   370 GWAWNMKQPSKELVRRTLEKYGDGTHAS 397
            |.|::.|:.||..|...:::.|||:|.|
  Rat   353 GLAYDRKRVSKAAVLARVKRTGDGSHKS 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9747NP_001287604.1 Delta9-FADS-like 135..376 CDD:239582 119/240 (50%)
FA_desaturase 140..343 CDD:278890 104/202 (51%)
Scd4XP_574671.7 Delta9-FADS-like 122..359 CDD:239582 118/237 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I10831
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X207
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.030

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