DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9747 and Scd3

DIOPT Version :9

Sequence 1:NP_001287604.1 Gene:CG9747 / 43591 FlyBaseID:FBgn0039754 Length:461 Species:Drosophila melanogaster
Sequence 2:NP_077770.1 Gene:Scd3 / 30049 MGIID:1353437 Length:359 Species:Mus musculus


Alignment Length:356 Identity:160/356 - (44%)
Similarity:220/356 - (61%) Gaps:30/356 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PPRGKLQLPPKREELPRSVVPKEIANHVPKDAIDLEEYTRTFVGDRVLGWQFQ----APLK---- 108
            ||.|.||  ..||::  ..||           :.|||..|..:.:.:....:|    .|.|    
Mouse    23 PPSGSLQ--NGREKV--KTVP-----------LYLEEDIRPEMKEDIYDPTYQDEEGPPPKLEYV 72

  Fly   109 WDKVIQISLLHIVA--GICLLTYPLRELNPYTTIWSFFVGGVAGFGVTAGAHRFWTHKSYKANTV 171
            |..:|.::|||:.|  ||.|:  |..:|  ||.:::|....::..|:.||.||.|:|::|||...
Mouse    73 WRNIILMALLHVGALYGITLV--PSCKL--YTCLFAFVYYVISIEGIGAGVHRLWSHRTYKARLP 133

  Fly   172 LRSILMVCYCVAGQNTLYDWVRDHRVHHKYSETDADPHNANRGFFFSHVGWLMMLKHPEVLRRGR 236
            ||..|::...:|.||.:|:|.||||.|||:|||.|||||:.|||||||||||::.|||.|..:|.
Mouse   134 LRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGG 198

  Fly   237 QIDMSDILADPVVRFHQKYFIPLKTFFCFILPTVIPVYCWGETWTLAFIQQCLFRYVSSLNFTWS 301
            ::||||:.|:.:|.|.::|:.|.....||||||::|.||||||:..:|....|.||...||.||.
Mouse   199 KLDMSDLKAEKLVMFQRRYYKPGILLMCFILPTLVPWYCWGETFLNSFYVATLLRYAVVLNATWL 263

  Fly   302 VNSAAHLWGSRPYDKRIMPSENIYVSLLAMGEGWHNYHHVFPWDYKAAELGNYTVNFTTMVLDAF 366
            |||||||:|.|||||.|.|.:|..|||.:||||:|||||.||:||.|:|. .:.:||||..:|..
Mouse   264 VNSAAHLYGYRPYDKNIDPRQNALVSLGSMGEGFHNYHHAFPYDYSASEY-RWHINFTTFFIDCM 327

  Fly   367 HKLGWAWNMKQPSKELVRRTLEKYGDGTHAS 397
            ..||.|::.|:.||..|...:::.|||:|.|
Mouse   328 AALGLAYDRKRVSKATVLARIKRTGDGSHKS 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9747NP_001287604.1 Delta9-FADS-like 135..376 CDD:239582 124/240 (52%)
FA_desaturase 140..343 CDD:278890 108/202 (53%)
Scd3NP_077770.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 6/12 (50%)
Delta9-FADS-like 97..337 CDD:239582 125/242 (52%)
FA_desaturase 102..306 CDD:278890 109/203 (54%)
Histidine box-1. /evidence=ECO:0000305 120..125 3/4 (75%)
Histidine box-2. /evidence=ECO:0000305 157..161 2/3 (67%)
Histidine box-3. /evidence=ECO:0000305 298..302 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10942
eggNOG 1 0.900 - - E1_COG1398
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63267
OrthoDB 1 1.010 - - D296120at33208
OrthoFinder 1 1.000 - - FOG0000495
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11351
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X207
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.930

Return to query results.
Submit another query.