DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bet5 and Trappc1

DIOPT Version :10

Sequence 1:NP_651778.1 Gene:Bet5 / 43590 FlyBaseID:FBgn0260860 Length:145 Species:Drosophila melanogaster
Sequence 2:NP_001034467.1 Gene:Trappc1 / 287427 RGDID:1311365 Length:145 Species:Rattus norvegicus


Alignment Length:143 Identity:79/143 - (55%)
Similarity:109/143 - (76%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTIFNLYIFDKFGTLLHYAEWNRTKKSGITREEEAKLTYGMLFSIKSFVSKISPHDPKEGFLYYK 65
            ||:.|||:||:.|..|||:||:|.|::||.:|||.||.|||||||:|||||:||.|.|:|||.::
  Rat     1 MTVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDGFLSFQ 65

  Fly    66 TNRYALHYLETPSGLKFVLNTDTTAINVKELLQQLYAKVWVEFVVRDPLWTPGTVVTSELFQSKL 130
            |:||.|||.|||:|:|.|:|||.....::::|..:|:.::|||||::||...|..|.||||:|:|
  Rat    66 TSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVEFVVKNPLCPLGQTVQSELFRSRL 130

  Fly   131 DEFVRQSPIFGIR 143
            |.:||..|.|..|
  Rat   131 DSYVRSLPFFSAR 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bet5NP_651778.1 Sybindin 3..137 CDD:282019 74/133 (56%)
Trappc1NP_001034467.1 TRAPPC1_MUM2 4..133 CDD:341445 72/128 (56%)

Return to query results.
Submit another query.