DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1983 and Plpbp

DIOPT Version :9

Sequence 1:NP_001287602.1 Gene:CG1983 / 43588 FlyBaseID:FBgn0039751 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001100790.1 Gene:Plpbp / 306544 RGDID:1308962 Length:275 Species:Rattus norvegicus


Alignment Length:252 Identity:129/252 - (51%)
Similarity:181/252 - (71%) Gaps:4/252 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLR--RTMAEFDVKAGLQHVLKRIDEVLLQRPKEVQAARPLLVAVSKTKPAEAVIEAYEGGQRDF 63
            |||  ...||..|...|:.|.:|:.:.:.:||:.:.|.:|.|||||||||.|.|||||..|||.|
  Rat     1 MLRGGSMTAELGVGLALRAVNERVQQSVARRPRGLPAIQPRLVAVSKTKPTEMVIEAYGHGQRTF 65

  Fly    64 GENYVQELEEKSRHPDILAKCPDIRWHFIGHMQSNKINKILSVPNLHMIQTVDSEKLATKLDAAW 128
            ||||||||.||:.:|.:|:.||:|:||||||:|...:||:::||||.|::|:||.|||.|::::|
  Rat    66 GENYVQELLEKASNPTLLSSCPEIKWHFIGHLQKQNVNKLMAVPNLSMLETIDSVKLADKVNSSW 130

  Fly   129 SKRQPTPEEPLQVLIQINTSGEDVKSGIEAKDAPALYQYIKSNLKHLNLMGIMTIGAFGFDYSNG 193
            .|: .:||. |:|::||||||||.|.|:...:..|:.::||::..:|..:|:||||:||.|.|.|
  Rat   131 QKK-GSPER-LKVMVQINTSGEDSKHGLLPSETVAVVEHIKASCPNLEFVGLMTIGSFGHDLSQG 193

  Fly   194 PNPDFVSLMQVHRSICEAHSLAPDSVLVSMGMSNDFDKAIEMGSTVVRVGSSIFGHR 250
            |||||..|:.:.:.:||...|..:.|.:|||||.||..|||:|||.:||||:|||.|
  Rat   194 PNPDFQRLLSLRQELCEKLGLPVEQVELSMGMSVDFQHAIEVGSTNIRVGSTIFGER 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1983NP_001287602.1 PLPDE_III_YBL036c_euk 15..248 CDD:143496 120/232 (52%)
PlpbpNP_001100790.1 PLPDE_III_YBL036c_euk 17..248 CDD:143496 120/232 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352252
Domainoid 1 1.000 242 1.000 Domainoid score I2167
eggNOG 1 0.900 - - E1_COG0325
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5211
Inparanoid 1 1.050 256 1.000 Inparanoid score I3091
OMA 1 1.010 - - QHG53991
OrthoDB 1 1.010 - - D1423577at2759
OrthoFinder 1 1.000 - - FOG0003600
OrthoInspector 1 1.000 - - oto97809
orthoMCL 1 0.900 - - OOG6_101083
Panther 1 1.100 - - LDO PTHR10146
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2475
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.