DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlc2 and CAM1

DIOPT Version :10

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001154755.1 Gene:CAM1 / 833756 AraportID:AT5G37780 Length:175 Species:Arabidopsis thaliana


Alignment Length:173 Identity:48/173 - (27%)
Similarity:78/173 - (45%) Gaps:35/173 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SQKQIAEFKEAFQLMDADKD--------------------------GIIGKNDLRAAFDSVGKIA 111
            :.:||:||||||.|.|.|.|                          |.|...:|.....|:|:..
plant     6 TDEQISEFKEAFSLFDKDGDVFVLSDLGFDFKRLSNCLETTPELSHGCITTKELGTVMRSLGQNP 70

  Fly   112 NDKELDAMLGE----ASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDKF 170
            .:.||..|:.|    .:|.|:|.:.|.|.|.:|..:   |.:|.:..||:.||.|  |.|...:.
plant    71 TEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDT---DSEEELKEAFRVFDKDQNGFISAAEL 132

  Fly   171 REMLMNFGDKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGK 213
            |.::.|.|:|.|.:||::...:..:|...||:....::::..|
plant   133 RHVMTNLGEKLTDEEVEEMIREADVDGDGQINYEEFVKIMMAK 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 47/171 (27%)
CAM1NP_001154755.1 PTZ00184 1..175 CDD:185504 47/171 (27%)

Return to query results.
Submit another query.