DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc2 and myl2b

DIOPT Version :9

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001035134.1 Gene:myl2b / 677750 ZFINID:ZDB-GENE-060331-137 Length:168 Species:Danio rerio


Alignment Length:181 Identity:72/181 - (39%)
Similarity:103/181 - (56%) Gaps:17/181 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ASATGSKRASGGSRGSRKSKRAGSSVFSVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSV 107
            |.....|||.|          |.|:|||:|.|.||.||||||.:||.::||.|.|||||..|.::
Zfish     2 APKKAKKRAEG----------ANSNVFSMFEQAQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAAL 56

  Fly   108 GKI-ANDKELDAMLGEASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDK 169
            |:: ...:|||.||.||.||||||..||:|..::  .|| |.:|.::.|||.||.:  |.:..|.
Zfish    57 GRLNVKQEELDEMLKEAPGPINFTVFLTMFGEKL--KGA-DAEETILNAFKVFDPEGKGTLRKDF 118

  Fly   170 FREMLMNFGDKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGKGEEEEEE 220
            ...||....|:|:.:|::..:.....|....:|...|:.::| .|||:::|
Zfish   119 LSRMLTTQADRFSPEEMEQMFSAFPPDAAGNLDYKNLVYIIT-HGEEKDQE 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 57/142 (40%)
myl2bNP_001035134.1 FRQ1 15..163 CDD:227455 62/151 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0031
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 1 1.000 - - FOG0000218
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23049
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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