DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mlc2 and myl11

DIOPT Version :10

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_989158.1 Gene:myl11 / 394763 XenbaseID:XB-GENE-969363 Length:170 Species:Xenopus tropicalis


Alignment Length:184 Identity:71/184 - (38%)
Similarity:105/184 - (57%) Gaps:18/184 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 APAASATGSKRASGGSRGSRKSKRAGSSVFSVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAF 104
            |||..|. .|.|.|||          |:|.|:|.|.||.||||||.::|.::||||.|.|||..|
 Frog     2 APAKKAK-RKAAEGGS----------SNVLSMFDQTQIQEFKEAFTVIDQNRDGIIDKEDLRDTF 55

  Fly   105 DSVGKI-ANDKELDAMLGEASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLID 166
            .::|:: ..::||:.|:.|||||||||..||:|..::  .||:.|| |:..|||..|.:  |.|.
 Frog    56 AAMGRLNVKNEELEEMVKEASGPINFTVFLTMFGEKL--KGADPED-VITGAFKVLDPEAKGSIK 117

  Fly   167 GDKFREMLMNFGDKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGKGEEEEEE 220
            .....|:|....|:||.:|:.:.:.....|....:|...:..::| .||::::|
 Frog   118 KQFLEELLTTQCDRFTPEEIKNMWTAFPPDVAGNVDYKNICYVIT-HGEDKDQE 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 55/142 (39%)
myl11NP_989158.1 PTZ00184 22..158 CDD:185504 55/138 (40%)

Return to query results.
Submit another query.