DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc2 and Myl2

DIOPT Version :9

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001030329.2 Gene:Myl2 / 363925 RGDID:1564245 Length:166 Species:Rattus norvegicus


Alignment Length:173 Identity:70/173 - (40%)
Similarity:103/173 - (59%) Gaps:17/173 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KRASGGSRGSRKSKRAGSSVFSVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKI-AN 112
            ||..|||          |:|||:|.|.||.||||||.:||.::||.|.|||||..|.::|:: ..
  Rat     8 KRLEGGS----------SNVFSMFEQTQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAALGRVNVK 62

  Fly   113 DKELDAMLGEASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDKFREMLM 175
            ::|:|.|:.||.||||||..||:|..::  .|| |.:|.::.|||.||.:  |.:..|..||||.
  Rat    63 NEEIDEMIKEAPGPINFTVFLTMFGEKL--KGA-DPEETILNAFKVFDPEGKGSLKADYVREMLT 124

  Fly   176 NFGDKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGKGEEEE 218
            ...::|:.:|:|..:.....|....:|...|:.::| .|||::
  Rat   125 TQAERFSKEEIDQMFAAFPPDVTGNLDYKNLVHIIT-HGEEKD 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 57/142 (40%)
Myl2NP_001030329.2 FRQ1 14..163 CDD:227455 63/162 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 1 1.000 - - FOG0000218
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23049
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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