DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc2 and sqh

DIOPT Version :10

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_511057.1 Gene:sqh / 31554 FlyBaseID:FBgn0003514 Length:174 Species:Drosophila melanogaster


Alignment Length:178 Identity:71/178 - (39%)
Similarity:107/178 - (60%) Gaps:10/178 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SKRASGGSRGS--RKSKRAGSSVFSVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKI 110
            |.|.:.|.|.:  ::::||.|:||::|.|.|||||||||.::|.::||.:.|.||.....|:||.
  Fly     2 SSRKTAGRRATTKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFVEKEDLHDMLASLGKN 66

  Fly   111 ANDKELDAMLGEASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFD--NDGLIDGDKFREM 173
            ..|..||.|:.||.||||||..||||..|:.   ..|.::|:..||..||  |.|::..|:.||:
  Fly    67 PTDDYLDGMMNEAPGPINFTMFLTLFGERLQ---GTDPEDVIKNAFGCFDEENMGVLPEDRLREL 128

  Fly   174 LMNFGDKFTMKEVDDAYDQMVIDDKNQI-DTAALIEMLTGKGEEEEEE 220
            |...||:||.::||:.|.:..|  ||.: |......:|....::::|:
  Fly   129 LTTMGDRFTDEDVDEMYREAPI--KNGLFDYLEFTRILKHGAKDKDEQ 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 60/142 (42%)
sqhNP_511057.1 PTZ00184 27..164 CDD:185504 60/141 (43%)

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