DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc2 and mlc-1

DIOPT Version :9

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_510829.2 Gene:mlc-1 / 181776 WormBaseID:WBGene00003369 Length:170 Species:Caenorhabditis elegans


Alignment Length:169 Identity:67/169 - (39%)
Similarity:95/169 - (56%) Gaps:10/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SRGSRK---SKRAGSSVFSVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSVGKIANDKEL 116
            |:.::|   .||:||.. :.|.||.|.||||||.:||.:|||||.|:||:..:.|:|:||.|.::
 Worm     2 SKAAKKKSSKKRSGSEA-AQFDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQI 65

  Fly   117 DAMLGEASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDKFREMLMN-FG 178
            |||:.|||||||||..||||..|:.   ..|.:..:|.||..||..  |.|..|...::|.| .|
 Worm    66 DAMIKEASGPINFTVFLTLFGERLT---GTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRG 127

  Fly   179 DKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGKGEEE 217
            :.....||...|......:..::|..|...::|...::|
 Worm   128 EPLDEDEVKAMYKGKPPIEGGEVDYKAFAHLITTGAQDE 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 59/142 (42%)
mlc-1NP_510829.2 FRQ1 13..159 CDD:227455 62/149 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0031
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 1 1.000 - - FOG0000218
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23049
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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