DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc2 and myl2a

DIOPT Version :9

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001373733.1 Gene:myl2a / 100537244 ZFINID:ZDB-GENE-120917-2 Length:169 Species:Danio rerio


Alignment Length:181 Identity:72/181 - (39%)
Similarity:107/181 - (59%) Gaps:16/181 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ASATGSKRASGGSRGSRKSKRAGSSVFSVFSQKQIAEFKEAFQLMDADKDGIIGKNDLRAAFDSV 107
            |.....|||:.|         |.|:|||:|.|.||.||||||.:||.::||.|.|||||..|.::
Zfish     2 APKKAKKRAAEG---------ANSNVFSMFEQAQIQEFKEAFTIMDQNRDGFIDKNDLRDTFAAL 57

  Fly   108 GKI-ANDKELDAMLGEASGPINFTQLLTLFANRMATSGANDEDEVVIAAFKTFDND--GLIDGDK 169
            |:: ...:|:|.||.|||||||||..||:|..::  .|| |.:|.::.|||.||.:  |::..:.
Zfish    58 GRLNVKQEEIDEMLKEASGPINFTVFLTMFGEKL--KGA-DPEETILNAFKVFDPEGKGILKKEY 119

  Fly   170 FREMLMNFGDKFTMKEVDDAYDQMVIDDKNQIDTAALIEMLTGKGEEEEEE 220
            ..|||....|:|:.:|::..:.....|....:|...|:.::| .|||:::|
Zfish   120 VTEMLTTQADRFSPEEMEQMFSAFPPDAAGNLDYKNLVHIIT-HGEEKDQE 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 57/142 (40%)
myl2aNP_001373733.1 FRQ1 16..164 CDD:227455 62/151 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 1 1.000 - - FOG0000218
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23049
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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