DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mlc2 and efcab11

DIOPT Version :9

Sequence 1:NP_524586.1 Gene:Mlc2 / 43587 FlyBaseID:FBgn0002773 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001107284.1 Gene:efcab11 / 100135073 XenbaseID:XB-GENE-962640 Length:163 Species:Xenopus tropicalis


Alignment Length:156 Identity:36/156 - (23%)
Similarity:61/156 - (39%) Gaps:49/156 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SVFSQKQIAE-----FKEAFQLMDADKDGIIGKNDLRAAFDSV-GKIANDKELDAML-------- 120
            |:.|:.|:::     |...|||.|....|.:.:.||:.|...: |...:..|:|:||        
 Frog     8 SLCSKPQVSDNDKKTFLRVFQLCDEGNKGYLSREDLKVAVVMLFGYKPSKLEVDSMLSSFMINTT 72

  Fly   121 GEASGPINFTQLLTL-------FANRMATSGAND-----------------------EDEVVIAA 155
            |..|.  ||.:::.|       |.|:.......|                       .:..|:.|
 Frog    73 GVTSD--NFLKMMALKKAAQLSFGNQREIFSVFDVHCRGFLTLEDFKRAFRQVAPHLSERTVVEA 135

  Fly   156 FKTF--DNDGLIDGDKFREMLMNFGD 179
            |:..  |:|||:....| |.::|:|:
 Frog   136 FREVDQDSDGLVSYKDF-EFVLNYGE 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mlc2NP_524586.1 PTZ00184 73..213 CDD:185504 35/153 (23%)
efcab11NP_001107284.1 FRQ1 14..152 CDD:227455 30/139 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1435392at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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