DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsod and F47G3.1

DIOPT Version :10

Sequence 1:NP_733352.3 Gene:Rsod / 43586 FlyBaseID:FBgn0051028 Length:1154 Species:Drosophila melanogaster
Sequence 2:NP_001359932.1 Gene:F47G3.1 / 180543 WormBaseID:WBGene00018576 Length:856 Species:Caenorhabditis elegans


Alignment Length:1178 Identity:228/1178 - (19%)
Similarity:369/1178 - (31%) Gaps:425/1178 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LHGE-------ITFRQMNATTVEIKANLEATLQYPDQVWSWGVRRFPVDYSNIDPDERCELSRLG 95
            |:||       |:....|..|..:..:::   :.|:....|.|......|......:.|...:..
 Worm    39 LYGEKLKGFLTISPADENGDTYIVSFDIK---EKPNDTLVWAVHTSSAPYDMAVMTDNCRRVKKS 100

  Fly    96 SQVLSFDEDLEYLVLPGNETSSWERNM-----QLIGDRGIWGKSLVLTEVNANARICATITTIQS 155
            ..|:                    :||     .:.|| |:.|.:||::..|:....|||:.....
 Worm   101 PPVV--------------------KNMPVTDSTIAGD-GLAGNTLVISGDNSEVLACATVIIPGK 144

  Fly   156 SVEHMAEARFN-TPVAGSVHFRWLAPAEGAVGDTLIYSDLYHIRAQPAALEEDRSQAGPFTQHHW 219
            .:.|   |.|: .|:.|.||   :.|.:.  ....:..||.::........|.:.....|.    
 Worm   145 ELMH---ASFHQEPIEGHVH---IIPIKN--NAVRLVPDLKYMPKYDYVEPEKKIMTWAFV---- 197

  Fly   220 KIYVTDIFKHDHHRTEDNCNFLQQVFDPQGSGAGKGIGDLDARL---GRIGVAKNALRSPQRSVF 281
                            |:|..|..                ..:|   ..:||       ..|:.|
 Worm   198 ----------------DSCTALND----------------STKLTDYSEVGV-------DSRATF 223

  Fly   282 RDAQLALLPSDLTIPHRTLYLVLFDNQHPDSYLACTKIRHVQPLTHKTFINSGGVKGEVTFMQRS 346
                :..||.:.|:....||       ..|...||..|.:|:|...|:.        .||..|..
 Worm   224 ----VFTLPENYTLESLALY-------REDKIFACADIVNVEPRILKSL--------GVTLRQTH 269

  Fly   347 KFDPTFLNFTLGAPLSQHVSRKFAEDVAAFRIHSLPPVPSRMGHEDYCLTTGDMHNPREINENIP 411
            .|:|                           :..|...|..:...|.||                
 Worm   270 YFEP---------------------------VIGLKSPPKELHIRDDCL---------------- 291

  Fly   412 PPGYGTQEQYPVGDLSGKLQGRNKGYWHQYVLPGTSSELNGLYWDVFLPLQGRYSIAQRSLVIYT 476
                         |:|.::.  :|.|...|  |..         ::|    |..||..:|||:  
 Worm   292 -------------DISTEIV--HKNYLSYY--PSV---------NIF----GSESIMLKSLVL-- 324

  Fly   477 FNRSNVTNITKMIWGCSSL-SQYQRNGIYQQNMVTAQVLFRYPVVGRVI-------------FRQ 527
             |.|           |::| .|:.|        ..|...|.:||:||::             .|.
 Worm   325 -NNS-----------CNALRPQFAR--------PAAIANFIHPVIGRIVLVDTDDKILLTGEIRN 369

  Fly   528 TAEQPWQDTTVLFEYLIQADGSTQNTTHD--HRWAIHSNAPGKDFYDWQQRCISAGPVYNPFRVD 590
            ..::.....|||.........|..:||.:  |:....:...||:     ::.::...|:|     
 Worm   370 IFDEMSTRATVLISNKTAESTSCAHTTCETCHKVENAAVVVGKN-----EKAVTMTGVFN----- 424

  Fly   591 WGNRSVDDFCRPSLASMCRVGAMDARSGTLTIAGGRRVAQKISRKMFVDGNLPLSGRHSILGKSL 655
            |.|.|                  |.:|..:.:           ..|.|..||.:           
 Worm   425 WFNIS------------------DMKSAIIDL-----------EWMKVCANLTV----------- 449

  Fly   656 VIYEDSGPKARGERLACSAVIGHFRRKVVAKEWYANGDSLTVSGRVEITQQSEYDVSN-VEVQLK 719
                          |...|:..|...|.||.     ..|.||:..|.:    ||..:| .|:.:.
 Worm   450 --------------LPSGALTMHAMVKRVAP-----FSSATVASLVAL----EYPANNYTEILIN 491

  Fly   720 GLQDNTGYYIHRTPVEANLAFPCEASTLYGHWNPFDVSPKSSPPPKRGTTDQYEMGDLSGKFGGL 784
            ..|                    :.|.:..|:.|.|.|..|.||          .|:.:     |
 Worm   492 KKQ--------------------KFSDVQAHFRPLDRSITSGPP----------CGEQN-----L 521

  Fly   785 EGVTQ----------FEDAYNDTNLPLF------GYNSIIGRSVVIQKKQKNARWACSTLERGYS 833
            .|||:          |....||::: :|      |..|::|.|::: |:.|:.  .|...|   .
 Worm   522 GGVTKLPWVEELKKNFMSHENDSSV-IFDERFVTGVTSMLGTSILL-KEGKDV--FCGHFE---P 579

  Fly   834 PSEARELRAIASFHHPTGYAYGYIKMTQLI-HNDGSQSETVIEVKLRHPGKNDRNSTRNHNWQIF 897
            |||  ...|.|...||..   |||||||.. .|..|...|.|...|::..:.|..          
 Worm   580 PSE--RTVAFAELGHPFD---GYIKMTQYTKSNWESGFPTEIYYSLKYMNQIDPT---------- 629

  Fly   898 VNPVGV--DAAVKPTITRCVAGGYVWNPYYTQLADPLNLDLYEQECSPDNPLRCYVGDVGARLGT 960
            |||..|  |......:| | :...::||          |.:.|.||:......|.:|....|...
 Worm   630 VNPESVTWDIVSDQNLT-C-SSAVIFNP----------LQVDESECTSQRYEFCPIGSASNRSKP 682

  Fly   961 IDLGGERVVLTDSNFPLEAPVGAIGRSI---VIFGPDHSHERFACANI----EPDHNVIKYINLQ 1018
            : |...|..||...|||..|...||:::   .|..|:    :..|..:    |.....:.|.|..
 Worm   683 L-LMHARWHLTAQGFPLSGPYSVIGKTLRLQSIKNPN----QIGCYPVKKVSEATFRWVVYTNTS 742

  Fly  1019 KPPRFVVAQFLDELRSVMGIPEWMLDVDARKTKELHGGACIQMIIHFKGPLAHRLELD--MSRLI 1081
                  ::....::....|:|.:.::||  .|:||:...|....|..       ||.|  :.:::
 Worm   743 ------LSTVQQKISDKAGVPSFKVEVD--YTRELYQTRCTIFRITI-------LENDEKLEQIL 792

  Fly  1082 AAGRLDAPSLFIPGYVNQKRKATISYRTCGVRDTNEKRTKNFKGGFYSSSSAP---NEPKPLVLA 1143
            .:..::|..     ::|.........:...|..||.     ......:||::.   :.|.|:.|.
 Worm   793 DSFDVEARK-----FINDTELVCSETQPLTVDATNA-----ISQNIITSSTSSLIFSIPLPISLL 847

  Fly  1144 FVVIGLAF 1151
            |:::...|
 Worm   848 FILLARCF 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RsodNP_733352.3 Sod_Cu 519..676 CDD:459663 26/171 (15%)
Sod_Cu 697..825 CDD:459663 30/144 (21%)
Sod_Cu <914..1005 CDD:459663 23/93 (25%)
F47G3.1NP_001359932.1 None

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