DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11498 and spata18

DIOPT Version :10

Sequence 1:NP_001334706.1 Gene:CG11498 / 43585 FlyBaseID:FBgn0039749 Length:571 Species:Drosophila melanogaster
Sequence 2:NP_001018198.1 Gene:spata18 / 497395 ZFINID:ZDB-GENE-050522-306 Length:490 Species:Danio rerio


Alignment Length:508 Identity:98/508 - (19%)
Similarity:190/508 - (37%) Gaps:133/508 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 LNTTPKPDVPSETVAWQLVRLFANPHESGLRQ---RCTRLLQALAQYEPGL-------------- 173
            :|::|...:..:..||     :.:.|.....|   ||..|::..::.:..|              
Zfish     9 VNSSPYSVLQDKLDAW-----YKDYHVYSCDQNLNRCCELVELTSKIQGQLFTILNLTAQEGGHY 68

  Fly   174 --RQTLRERRRSFDNAVQGLGVHGLTTDASGQLISLHVALKTELQRHVDTYKMAIHKLEELSMVT 236
              ..||:.|...:..:...:....:::|.|..||...|....:::.....::..:.|:|:....|
Zfish    69 SGVDTLKSRLLPWLGSCFTIAASAVSSDTSLSLIQESVEKDRKIRELSSVHESNLQKIEDQLCST 133

  Fly   237 VNQDPAHSSHQRLLAINYGDIQQRLID---------NKTLLTMLD------------KPALKQLQ 280
                          .|....:::.|:|         ||:..|:|.            :.|..||.
Zfish   134 --------------RIELDSVKRELVDTHIELDSTKNKSATTLLATEDEILHLKSELRVAQDQLD 184

  Fly   281 TLVENLSTRVENDKEVLTCVGQVRRLDAQ------ALVEKRPAAGLLMNFSRGCEVVLHMMGPEG 339
            .....|....:.:::|.....:|..|:|:      .|.:.|..:.||..                
Zfish   185 LYKRKLDVLDDYERQVRILRDEVSFLNAEKTVLQDRLAKSRSPSPLLRR---------------- 233

  Fly   340 GPPGSSHSIGKTTPPGGASTSSCSDGYHSDDSGSDDSSEMVSLYRNLYVENRADA----LEALDS 400
                 |.|:   :|..|.|.:      .:..:.|...:.:||.:.:||...|.::    |:.:|.
Zfish   234 -----SRSV---SPVRGESPT------RAQLTSSSRHARLVSRFSDLYATERLESQSLLLKYIDD 284

  Fly   401 LPQIKHAHSLKGKILFSMIVLSFRLCHGMRERKVLEVRRVLNCPLDSSSETTL---SLDRSVRQH 462
            |..::       :|||...|.||:.......:..|.||:.|       |.|.:   ||:.:|..:
Zfish   285 LETVQ-------RILFIAAVESFQAAKLAYRQFKLRVRKTL-------SSTHIGPESLEDAVVDY 335

  Fly   463 LFETAESFPLGEIERSVFNQVLSTLHEYPCLESCPPLTHYV-------SACVRLAWRMINQKAPY 520
            :   ..:..|.:::.|: |.|::.::..|.: |.||...:|       .|| |:|:.|.....| 
Zfish   336 I---VRNLDLYDVQTSI-NDVINAMNVNPRI-SFPPEVDFVLISSFIREAC-RIAFAMQTLDPP- 393

  Fly   521 YLDMDFNL-GFLRPE-KHERHPQADRRSDLIKAFLWPALMQNNQCAFKAVVAT 571
             ||:.|:. |.|..: |:.|...::..:.|:...:||||::.:....|....|
Zfish   394 -LDLAFSSDGELYSDVKYRRSFDSEFTAPLVAFHVWPALLEGDTVILKGEAVT 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11498NP_001334706.1 MIEAP 378..571 CDD:464982 51/208 (25%)
spata18NP_001018198.1 Mplasa_alph_rch <103..>221 CDD:275316 19/131 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..253 8/58 (14%)
MIEAP 255..445 CDD:464982 51/211 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 455..490
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.