DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and Ptger4

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_114465.3 Gene:Ptger4 / 84023 RGDID:628641 Length:488 Species:Rattus norvegicus


Alignment Length:525 Identity:120/525 - (22%)
Similarity:200/525 - (38%) Gaps:122/525 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DAKDSDSPSSELNIPYTVFEVLVAIVSIIGNVLVIIVFRRERKLRRRTNYY--IVSLAMADLLVG 91
            :|..|.:| ..||.|.|:..|:. |..::||::.|:|..:.||.::.|.:|  :..||:.|||..
  Rat     7 NASFSSTP-ERLNSPVTIPAVMF-IFGVVGNLVAIVVLCKSRKEQKETTFYTLVCGLAVTDLLGT 69

  Fly    92 ALGIPFAILASM--GLPRNLHACLFTVSLLVV--LCTISIFCLVAVSVDRYWAILYPMAYSRNVR 152
            .|..|..|...|  ..|.:...|.::..:|:.  |..:||.|  |:|::||.||.:...||..|.
  Rat    70 LLVSPVTIATYMKGQWPGDQALCDYSTFILLFFGLSGLSIIC--AMSIERYLAINHAYFYSHYVD 132

  Fly   153 TRTAIFIISMCWVAGTIVGFLPLFG----------------WHADVNHNQECLFVEVMDYNYL-- 199
            .|.|...:...:.:..:...||..|                |..:|.      ......|.|.  
  Rat   133 KRLAGLTLFAVYASNVLFCALPNMGLGRSERQYPGTWCFIDWTTNVT------AYAAFSYMYAGF 191

  Fly   200 -VFLYFATIITPALLMLAFYTHIYRVIIKQVRQIVTMNPASDLSRRSS-----------AAVVQV 252
             .||..||::...|:..|        :::..||.:         ||:|           |||..|
  Rat   192 SSFLILATVLCNVLVCGA--------LLRMHRQFM---------RRTSLGTEQHHAAAAAAVASV 239

  Fly   253 TTPGRGGHTGTMLRVLGAARKRDVK--ATQNLSIIVLFF------MICWIPLYTINCIKAFCPDC 309
            ...|....:..:.|:....|:|..:  |...:.:::|..      :||.|||    .::.|....
  Rat   240 ACRGHAAASPALQRLSDFRRRRSFRRIAGAEIQMVILLIATSLVVLICSIPL----VVRVFINQL 300

  Fly   310 YVHPKLT--------LFCIILSHLNSAVNPVLYAYHLKDFRA----ALKNLLLKMMGVDIDQQA- 361
            | .|.:.        |..|.::.:|..::|.:|....|...:    .:|.|..::.|...|..| 
  Rat   301 Y-QPSVVKDISRNPDLQAIRIASVNPILDPWIYILLRKTVLSKAIEKIKCLFCRIGGSGRDGSAQ 364

  Fly   362 ---EAIHRFSVASQHRLQSMDSNMR----STQPRLYVGEYSPIWLRQQQEALKNSQLLPKCGVVS 419
               |:....|..|.|....:...:|    ::|..||:.:.:       :.:|....|||..    
  Rat   365 HCSESRRTSSAMSGHSRSFLSRELREISSTSQTLLYLPDLT-------ESSLGGKNLLPGT---- 418

  Fly   420 PCFNNINQTVAAVASVTTDLEREMWNIVEASSGAELGETSYE--FPSPAPGSQR---SSERNSSS 479
               :.:..|.|...|:.|      ..|.|.|..:: |:.|..  ......||||   :|:.||..
  Rat   419 ---HGMGLTQADTTSLRT------LRISETSDSSQ-GQDSESVLLVDEVSGSQREEPASKGNSLQ 473

  Fly   480 TVPPA 484
            ...|:
  Rat   474 VTFPS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 49/192 (26%)
7tm_1 58..334 CDD:278431 75/327 (23%)
Ptger4NP_114465.3 7tmA_PGE2_EP4 18..344 CDD:320270 82/356 (23%)
TM helix 1 20..44 CDD:320270 8/24 (33%)
TM helix 2 55..77 CDD:320270 8/21 (38%)
TM helix 3 93..115 CDD:320270 6/23 (26%)
TM helix 4 138..154 CDD:320270 0/15 (0%)
TM helix 5 181..204 CDD:320270 6/22 (27%)
TM helix 6 274..296 CDD:320270 6/25 (24%)
TM helix 7 311..336 CDD:320270 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..380 5/21 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.