DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and trhra

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:XP_687246.4 Gene:trhra / 558878 ZFINID:ZDB-GENE-100922-18 Length:393 Species:Danio rerio


Alignment Length:402 Identity:109/402 - (27%)
Similarity:175/402 - (43%) Gaps:79/402 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SDSPSSELNIPYTVFEVLVAI----VSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADLLVGAL 93
            |:...::.::.|.|..:|:.|    |.|:|||:||:|....:.:|..||.|:||||:|||:|   
Zfish     7 SNGTWTDNSVEYKVVSILLVILICGVGIVGNVMVILVVLTTKHMRTPTNCYLVSLAVADLMV--- 68

  Fly    94 GIPFAILASMGLPRNLHACLF------------TVSLLVVL------CTISIFCLVAVSVDRYWA 140
                  |.:.||| |:...||            :::....|      |:|:.|     :::||.|
Zfish    69 ------LTAAGLP-NITEILFGGQWVYGYAGCLSITYFQYLGINASSCSITAF-----TIERYIA 121

  Fly   141 ILYPMAYSRNVRTRTAIFIISMCWVAGTI--VGFLPLFGWHADVNHNQ---EC-------LFVEV 193
            |.:|:..........|..||.:.||..::  |.:..|......|..|.   .|       |::.:
Zfish   122 ICHPIKAQFMCTLSRAKKIIVLVWVLTSLYCVMWFYLLDTREKVYDNAVLVTCGYKVSRELYLPI 186

  Fly   194 MDYNYLVFLYFATIITPALLMLAFYTHIYRVIIKQVRQIVTMNP-ASD--LSRRSSAAVVQVTTP 255
            ...:|.||     .:.|.||....|..|.|::.        :|| .||  .|||:......|...
Zfish   187 YFTDYAVF-----YVIPLLLATVLYGLIARILF--------LNPLPSDPKESRRNWKKESSVHGN 238

  Fly   256 GRGGHTGTMLRVLGAARKRDVKATQNLSIIVLFFMICWIPLYTINCIKAFCPDCYVHPKLTLFCI 320
            .|.....|.:     |.:|.|  |:.|:::|:.|.:.|:|..|:..:.:|..:.|:.....|||.
Zfish   239 SRSSSNSTTV-----ASRRQV--TKMLAVVVILFALLWMPYRTLVVVNSFLKEAYLDTCFLLFCR 296

  Fly   321 ILSHLNSAVNPVLYAYHLKDFRAALKNLLLKMMGVDIDQQAEAIHRFSVASQHRLQSMDSNMRST 385
            :..::|||:||::|....:.||||...|....     .|::|....:|||..:.:....||..| 
Zfish   297 LCIYMNSAINPIIYNAMSQKFRAAFHKLCHCR-----PQRSEKPPAYSVALTYSVIKETSNGES- 355

  Fly   386 QPRLYVGEYSPI 397
             |..|..|...|
Zfish   356 -PDHYTTELDDI 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 55/201 (27%)
7tm_1 58..334 CDD:278431 84/308 (27%)
trhraXP_687246.4 7tm_4 28..>171 CDD:304433 45/157 (29%)
7tm_1 36..310 CDD:278431 84/308 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.