DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdoR and Lgr5

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001100254.1 Gene:Lgr5 / 299802 RGDID:1307733 Length:907 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433
7tm_1 58..334 CDD:278431
Lgr5NP_001100254.1 LRRNT 33..70 CDD:214470
LRR 1 44..64
LRR 2 65..88
leucine-rich repeat 68..91 CDD:275380
LRR_RI 88..372 CDD:238064
LRR 3 89..112
LRR_8 92..150 CDD:290566
leucine-rich repeat 92..115 CDD:275380
LRR 4 114..136
leucine-rich repeat 116..139 CDD:275380
LRR 5 137..160
LRR_8 138..198 CDD:290566
leucine-rich repeat 140..163 CDD:275380
LRR 6 162..184
leucine-rich repeat 164..187 CDD:275380
LRR 7 186..208
LRR_8 188..246 CDD:290566
leucine-rich repeat 188..211 CDD:275380
LRR 8 209..232
leucine-rich repeat 212..235 CDD:275380
LRR 9 233..256
leucine-rich repeat 236..258 CDD:275380
LRR_8 257..314 CDD:290566
LRR 10 257..279
leucine-rich repeat 259..282 CDD:275380
LRR 11 281..303
leucine-rich repeat 283..304 CDD:275380
LRR 12 304..327
leucine-rich repeat 307..353 CDD:275380
LRR 13 328..350
LRR 14 351..375
LRR_8 352..410 CDD:290566
leucine-rich repeat 354..375 CDD:275380
leucine-rich repeat 376..399 CDD:275380
LRR 15 377..396
LRR 16 397..420
leucine-rich repeat 400..423 CDD:275380
LRR 17 422..444
leucine-rich repeat 445..467 CDD:275378
LRR 18 564..585
7tm_1 575..820 CDD:278431
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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