DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdoR and Htr2a

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_058950.1 Gene:Htr2a / 29595 RGDID:61800 Length:471 Species:Rattus norvegicus


Alignment Length:484 Identity:128/484 - (26%)
Similarity:213/484 - (44%) Gaps:101/484 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EGPLLPLHAATTSKDAKDSDSP------------SSELNIPYTVFEVL--------------VAI 53
            :||.| .|....|:||..|::.            |.|..:|.|...:|              |.|
  Rat    23 DGPRL-YHNDFNSRDANTSEASNWTIDAENRTNLSCEGYLPPTCLSILHLQEKNWSALLTTVVII 86

  Fly    54 VSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADLLVGALGIPFAILASM-----GLPRNLHACL 113
            ::|.||:|||:....|:||:..|||:::|||:||:|:|.|.:|.::|..:     .||..|  |.
  Rat    87 LTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWPLPSKL--CA 149

  Fly   114 FTVSLLVVLCTISIFCLVAVSVDRYWAILYPMAYSR-NVRTRTAIFIISMCWVAGTIVGFLPLFG 177
            ..:.|.|:..|.||..|.|:|:|||.||..|:.:|| |.||:..:.||::..::..|...:|:||
  Rat   150 IWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFG 214

  Fly   178 WHAD--VNHNQECLFVEVMDYNYLVFLYFATIITPALLMLAFYTHIYRVIIKQVRQIVTMNPASD 240
            ...|  |.....||   :.|.|:::...|.....|..:|:.    .|.:.||.:::..|: ..||
  Rat   215 LQDDSKVFKEGSCL---LADDNFVLIGSFVAFFIPLTIMVI----TYFLTIKSLQKEATL-CVSD 271

  Fly   241 LSRR--------------SSAAVVQVT---TPGRGGHTGTMLRVLGAARKRDVKATQNLSIIVLF 288
            ||.|              ||..:.|.:   .||......||..:     ..:.||.:.|.|:...
  Rat   272 LSTRAKLASFSFLPQSSLSSEKLFQRSIHREPGSYAGRRTMQSI-----SNEQKACKVLGIVFFL 331

  Fly   289 FMICWIPLYTINCIKAFCPD-C---YVHPKLTLFCIILSHLNSAVNPVLYAYHLKDFRAALKNLL 349
            |::.|.|.:..|.:...|.: |   .:...|.:| :.:.:|:|||||::|....|.:|:|..   
  Rat   332 FVVMWCPFFITNIMAVICKESCNENVIGALLNVF-VWIGYLSSAVNPLVYTLFNKTYRSAFS--- 392

  Fly   350 LKMMGVDIDQQAEAIHRFSVASQHRLQSMDSNMRSTQPRLYVGEYSPIWLRQQQEALKNSQLLPK 414
             :.:.....:..:.:....|.:...|....|.::..|.:           ..|::|   .|.:..
  Rat   393 -RYIQCQYKENRKPLQLILVNTIPALAYKSSQLQVGQKK-----------NSQEDA---EQTVDD 442

  Fly   415 CGVVS--------PCFNNI---NQTVAAV 432
            |.:|:        .|.:||   |:.|:.|
  Rat   443 CSMVTLGKQQSEENCTDNIETVNEKVSCV 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 61/175 (35%)
7tm_1 58..334 CDD:278431 93/304 (31%)
Htr2aNP_058950.1 7tmA_5-HT2A 75..391 CDD:341345 99/331 (30%)
TM helix 1 77..101 CDD:341345 8/23 (35%)
TM helix 2 110..132 CDD:341345 11/21 (52%)
TM helix 3 149..171 CDD:341345 7/21 (33%)
Agonist binding. /evidence=ECO:0000250|UniProtKB:P41595 155..160 1/4 (25%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 172..174 1/1 (100%)
TM helix 4 194..210 CDD:341345 3/15 (20%)
TM helix 5 232..255 CDD:341345 4/26 (15%)
TM helix 6 322..344 CDD:341345 5/21 (24%)
Agonist binding. /evidence=ECO:0000250|UniProtKB:P41595 336..340 2/3 (67%)
TM helix 7 359..384 CDD:341345 9/25 (36%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 376..380 2/3 (67%)
PDZ-binding. /evidence=ECO:0000250|UniProtKB:P28223 469..471 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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