DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdoR and ser-3

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_491954.1 Gene:ser-3 / 259744 WormBaseID:WBGene00004778 Length:610 Species:Caenorhabditis elegans


Alignment Length:571 Identity:118/571 - (20%)
Similarity:187/571 - (32%) Gaps:239/571 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TVFEVLVAIVSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADLLVGALGIPFAILASMGLPR-- 107
            :|..|||.:| ::||.|||......|:||..|...|:|||:||||||.:.:||:| |:..|.:  
 Worm    63 SVLTVLVVVV-VLGNALVIAAVLLRRRLRSATGLLILSLALADLLVGTVILPFSI-ANEVLDQYW 125

  Fly   108 --NLHACLFTVSLLVVLCTISIFCLVAVSVDRYWAILYPMAYSRNVRTRTAIFIISMCWVAGTIV 170
              ....|...::|.:.:||.||:.|||:|:|||.||:.|:.|...|....|...:::.|: |:.:
 Worm   126 IFGETWCTIWLTLDIWMCTASIYNLVAISIDRYIAIIKPLNYPMLVTKFRARCTVAIVWI-GSFL 189

  Fly   171 GFLPLFGWHADVNHNQ---ECLFVEVMDYNYLVFLYFATIITPALLMLAFYTHIY---RVIIKQV 229
            ...|.|...:.:...:   .|..... ...|:||...::...|.::::..|..||   |...|.:
 Worm   190 ICSPSFFLASSIKDKETPCRCTPANA-GRVYVVFSASSSFYIPMIIVVFVYFRIYVAARAATKSI 253

  Fly   230 ---RQIVT------MNPASDL----------------SRRSSAAVVQVT---------------- 253
               ...||      .||.|.|                ..|.|:.|.|:|                
 Worm   254 YSGMMSVTAAANKKQNPKSYLLNHPDVINKDSLPMLRVHRGSSVVAQITPNKPYNTCRQNGNSID 318

  Fly   254 ----------------------------------------------------------------- 253
                                                                             
 Worm   319 ATANGTSQITAAATKARKFANDSAKTLVNRGAVGATQQAPIGARFKRHGRDSESSVDSMNGTNSY 383

  Fly   254 --TPGRGGH-------------------------------------------------------- 260
              ||.:.|:                                                        
 Worm   384 SATPHKSGNEELGSLIENSRSSSTDSNEKTEQLTNQTDDNFSMSNNNNNGDEKEAFDESLLSESK 448

  Fly   261 ---------------TGTMLRVLGAARKR---DVKATQNLSIIVLFFMICWIPLYTINCIKAFCP 307
                           .|...|..||..||   ::||.:.::|:...|:.||:....:..::....
 Worm   449 KKSKSLASKFNHLMRRGQKKRTAGAYEKRLSLEIKAAKTVAIVTGCFIFCWLGFALVYGLEIKLN 513

  Fly   308 DCYVHPKLTLFCII--LSHLNSAVNPVLYAYHLKDFRAALKNLLLKMMGVDIDQQAEAIHRFSVA 370
            |       .::.|:  |.:||||:|||:|....::||...|.||             ..|..:  
 Worm   514 D-------VVWSIVFWLGYLNSALNPVIYTVFNREFRICFKRLL-------------TCHHLN-- 556

  Fly   371 SQHRLQSMDSN-------MRSTQ-----PRLYVGEYSPIWLRQQQEALKNS 409
              |..|...:|       :|||.     |:..:|.|:     |.|.:.|:|
 Worm   557 --HPTQKYTNNNSYNSTAIRSTNAVNRVPQTSLGNYT-----QTQNSEKSS 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 54/174 (31%)
7tm_1 58..334 CDD:278431 93/469 (20%)
ser-3NP_491954.1 7tmA_Octopamine_R 80..>252 CDD:320191 52/174 (30%)
TM helix 2 94..116 CDD:320191 12/21 (57%)
TM helix 3 133..155 CDD:320191 8/21 (38%)
TM helix 4 178..194 CDD:320191 2/16 (13%)
TM helix 5 217..240 CDD:320191 4/22 (18%)
7tm_GPCRs <479..546 CDD:391938 19/73 (26%)
TM helix 6 479..509 CDD:341315 6/29 (21%)
TM helix 7 514..539 CDD:341315 11/31 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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