DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdoR and Htr1d

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_036984.1 Gene:Htr1d / 25323 RGDID:2847 Length:374 Species:Rattus norvegicus


Alignment Length:380 Identity:109/380 - (28%)
Similarity:170/380 - (44%) Gaps:51/380 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SITDFSFEGPLLPLHAATTSKDAKDSDSPS--SELNIPYTVFEVLVAIVSIIGNVLVIIVFRRER 70
            |:.:.|.||  ||..|:..|.:|..:..|.  ..|.|...|...::.:.:::.|..|:......:
  Rat     2 SLPNQSLEG--LPQEASNRSLNATGAWDPEVLQALRISLVVVLSIITLATVLSNAFVLTTILLTK 64

  Fly    71 KLRRRTNYYIVSLAMADLLVGALGIPFAILASMGLPRNLH--ACLFTVSLLVVLCTISIFCLVAV 133
            ||....||.|.|||..||||..|.:|.:|..:.....|..  .|...||..:..||.||..|..:
  Rat    65 KLHTPANYLIGSLATTDLLVSILVMPISIAYTTTRTWNFGQILCDIWVSSDITCCTASILHLCVI 129

  Fly   134 SVDRYWAILYPMAYSRNVRTRTAIFIISMCWVAGTIVGFLPLFGWHADVNHNQ--ECLFVEVMDY 196
            ::||||||...:.||:......|..:|:..|.....:...||| |.....|.:  :|| |.....
  Rat   130 ALDRYWAITDALEYSKRRTAGHAAAMIAAVWAISICISIPPLF-WRQATAHEEMSDCL-VNTSQI 192

  Fly   197 NYLVFLYFATIITPALLMLAFYTHIYRVIIKQVRQIVTMNPASDLSRRSSAAVVQVTTPGRG--- 258
            :|.::........|::|::..|..||.....::     :||.|...:|.:.|  |:.|...|   
  Rat   193 SYTIYSTCGAFYIPSILLIILYGRIYVAARSRI-----LNPPSLYGKRFTTA--QLITGSAGSSL 250

  Fly   259 ---------GHTGTM-------------------LRVLGAARKRDVKATQNLSIIVLFFMICWIP 295
                     .||.|:                   .:.:.|||:|  |||:.|.||:..|:|||:|
  Rat   251 CSLNPSLHESHTHTVGSPLFFNQVKIKLADSILERKRISAARER--KATKTLGIILGAFIICWLP 313

  Fly   296 LYTINCIKAFCPD-CYVHPKLTLFCIILSHLNSAVNPVLYAYHLKDFRAALKNLL 349
            .:.::.:...|.| |::||.|..|...|.:|||.:|||:|....:|||.|.:.::
  Rat   314 FFVVSLVLPICRDSCWIHPALFDFFTWLGYLNSLINPVIYTVFNEDFRQAFQRVV 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 49/171 (29%)
7tm_1 58..334 CDD:278431 91/311 (29%)
Htr1dNP_036984.1 7tmA_5-HT1B_1D 32..364 CDD:320455 98/342 (29%)
TM helix 1 38..62 CDD:320455 3/23 (13%)
TM helix 2 71..93 CDD:320455 12/21 (57%)
TM helix 3 109..131 CDD:320455 7/21 (33%)
Agonist binding. /evidence=ECO:0000250 111..120 2/8 (25%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250 132..134 1/1 (100%)
TM helix 4 154..170 CDD:320455 2/15 (13%)
TM helix 5 192..215 CDD:320455 3/22 (14%)
TM helix 6 297..319 CDD:320455 9/21 (43%)
Agonist binding. /evidence=ECO:0000250 311..315 2/3 (67%)
TM helix 7 332..357 CDD:320455 11/24 (46%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250 349..353 3/3 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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