DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and dmsr-13

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_504730.1 Gene:dmsr-13 / 188522 WormBaseID:WBGene00020524 Length:362 Species:Caenorhabditis elegans


Alignment Length:365 Identity:66/365 - (18%)
Similarity:135/365 - (36%) Gaps:81/365 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YTVFEVLVAIVSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADLLVGALGIPFAILASMG---- 104
            |.:...|| :.:...|::::.|...:..:|...|..::.:|:.|......|:....|.|..    
 Worm    43 YYILTFLV-VFAFFANIMIVKVLSHKEMIRSGVNVTMLLIAVCDFGCSIAGLLQLFLRSYSDNYT 106

  Fly   105 -------------LPRNLHACLFTVSLLVVLCTISIFCLVAVSVDRYWAILYPMAYSRNVRTRTA 156
                         |....||....:::.:..|.:....:...:.| .|       .|.|...|.|
 Worm   107 SYPTAYGQIAVDYLAVAFHASSLYLAVGMAFCRVKSLNIANRNKD-LW-------QSPNYAVRVA 163

  Fly   157 IFIISMCWVAGTIVGFLPLFGWHADVNHNQECLFVEVMDYNYL---VFLYFATI-------ITPA 211
            ..:.:..::..|.|.|:     :|..|..:|.:::::.|.:.|   :|:..:.:       |.|.
 Worm   164 CALCAPVFLIATFVLFI-----NAVKNTEEEGIYLDISDLSLLSECLFMKASLMASGLCFKIAPC 223

  Fly   212 LLMLAFYTHIYRVIIKQVRQIVTMNPASDLSRRS--SAAVVQVTTPGRGGHTGTMLRVLGAARKR 274
            ||||.....:.|.|              |..::|  :||..|                .|...|.
 Worm   224 LLMLVLSLFLLRRI--------------DEGKQSAQNAAANQ----------------KGKKDKI 258

  Fly   275 DVKATQNLSIIVLFFMICWIPLYTINCIKAFCPDCYVH--PKLTLFCIILSHLNSAVNPVLYAYH 337
            | ::::.:..:::.|:|...|....:.:..|....|::  ..|::|..||:..|:..:.::|:..
 Worm   259 D-RSSRFIQFVLVVFLITESPQGVFSILGGFMILDYINYFQNLSIFMNILAFFNTTTSFIIYSSL 322

  Fly   338 LKDFRAALKNLLLKMMGVD---IDQQAEAIHRFSVASQHR 374
            ...||.....|.|....::   :.:....:|  |:|...|
 Worm   323 SAKFRRIFAQLFLPSQVLEKIYLKRSTVVVH--SIAHSSR 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 34/194 (18%)
7tm_1 58..334 CDD:278431 54/306 (18%)
dmsr-13NP_504730.1 7tmA_FMRFamide_R-like 40..330 CDD:320109 60/331 (18%)
TM helix 1 42..66 CDD:320109 5/23 (22%)
TM helix 2 75..97 CDD:320109 4/21 (19%)
TM helix 3 115..137 CDD:320109 3/21 (14%)
TM helix 4 161..177 CDD:320109 3/15 (20%)
TM helix 5 208..228 CDD:320109 5/19 (26%)
TM helix 6 259..284 CDD:320109 4/25 (16%)
TM helix 7 298..323 CDD:320109 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.