DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and srw-143

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_503798.3 Gene:srw-143 / 186788 WormBaseID:WBGene00005890 Length:368 Species:Caenorhabditis elegans


Alignment Length:355 Identity:71/355 - (20%)
Similarity:129/355 - (36%) Gaps:83/355 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FEVLVAIVSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADLLVGALGIPFAILASMG--LPRNL 109
            :|..::|.||..|:...::..|:.......|..:..:::.|:    ..:.|.:..|.|  :....
 Worm    39 YEHYLSIASIFINIFHFLILIRKPLRSSSINIIMAFISIFDI----CSMLFRMKQSYGPSIEYIF 99

  Fly   110 HACL-----FTVSLLVVLCTI-------SIFCLVAVSVDRYWAILYPM--AYSRNVRTRTAIF-I 159
            ..|:     |.|.|..:|..:       |.:.|.::::.|...|..||  .|.|.....|::| :
 Worm   100 DPCMQSKWYFNVYLEKILLVVKDHSQRSSTWLLFSIALIRTLVIRNPMNPKYERLAHPPTSLFTM 164

  Fly   160 ISMCWVAGTIVGFLPLFGWHADV---NHNQECLFVEVMDYNYLVFLYF---ATIITPALLMLAFY 218
            |.:..:.|.| .....||  :|:   ||...|      |.:.::|.|.   |:......::|..|
 Worm   165 ICINLIFGPI-SIATFFG--SDITSQNHTSSC------DPDGVLFYYLDISASYKQNDGMILKIY 220

  Fly   219 THIYRVIIKQVR----QIVTMNPASDLSRRSSAAVVQVTTPGRGGHTGTMLRVLGAARKRD-VKA 278
            |.|..|:...:.    .|||:....:|.:..:                ...|:..:.:..| .|.
 Worm   221 TLINSVVSTIIPCFIFPIVTVFLVKELWKAEA----------------NRKRLFSSKKVNDSSKN 269

  Fly   279 TQNLSIIVLFFMICWIPL-YTINCIKAFCPDCYVHPKLTLFCIILSHLNSAVNPVLYA------- 335
            ||.:..:...|.|...|: .:|..       .|...:...|.|||..::...:.:|.|       
 Worm   270 TQLVLFLTCVFFIAQFPIGISIGA-------SYFFSETPGFMIILHEISYIFSVILVANTFSHFF 327

  Fly   336 ---YHLKDFRAALKNLL--------LKMMG 354
               :....:||.||..:        |:|.|
 Worm   328 ICIFMSSQYRAELKKSIYCRTKAKVLQMNG 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 40/190 (21%)
7tm_1 58..334 CDD:278431 58/304 (19%)
srw-143NP_503798.3 7TM_GPCR_Srw 38..347 CDD:370978 68/343 (20%)
TM helix 2 69..94 CDD:320109 5/28 (18%)
TM helix 3 115..137 CDD:320109 3/21 (14%)
TM helix 4 162..178 CDD:320109 4/16 (25%)
TM helix 5 218..241 CDD:320109 6/22 (27%)
TM helix 6 267..292 CDD:320109 6/24 (25%)
TM helix 7 307..333 CDD:320109 3/25 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.