DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and egl-6

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_001257033.1 Gene:egl-6 / 183513 WormBaseID:WBGene00001175 Length:395 Species:Caenorhabditis elegans


Alignment Length:411 Identity:89/411 - (21%)
Similarity:155/411 - (37%) Gaps:107/411 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ELNIPYTVFEVLVAIVSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADLLVGALGIPFAILASM 103
            |::||   ..:.:.|.....||..|||..|:| :|...|..:..|::|..|:......:.:|...
 Worm    34 EIHIP---LSISICIFGAASNVFNIIVLTRKR-MRTPINILLTGLSIAQWLLATNYFLYLLLEYY 94

  Fly   104 GLPRNLHACL-------------FTVSLLVVLCTISIFCLVAVSVDRYWAILYPMAYSRNV-RTR 154
                 .:.|:             |.|:|..|..||:....:.|:|.||.|:.:|:..:|.: :.:
 Worm    95 -----RYQCVQLLWSEAFTRYRFFNVNLNTVFHTIAFTTTIVVAVFRYCALKFPIQANRFIYKCQ 154

  Fly   155 TAIFIISMCWVAGTIVGFLPLF----------------------GWHADVNHNQECLFVEVMDYN 197
            .||....:.|:...|:. ||||                      |...|:::.:..|.|..:.:.
 Worm   155 PAIAANVIIWIIIPIIS-LPLFFISEVKIVARDHVAYDLQCEMEGPLYDLSYQESPLLVSAVFWA 218

  Fly   198 Y-LVFLYFATIITPALLMLAFYTHIYRVIIKQVRQIVTMNPASDLSRRSSAAVVQVTTPGRGGHT 261
            : :||....::|...||            |..:|.:.::.......:|:..|.:...:..:    
 Worm   219 FGIVFKLLPSLILSILL------------IALIRSLKSVERRRKNWKRTQGANICTNSERK---- 267

  Fly   262 GTMLRVLGAARKRDV--KATQNLSIIVLFFMICWIPLYTIN-CIKAFCPDC---YVHPKLTLFCI 320
                    |.||...  :.|:.|.||:|..::..:|:..:| |:..:..:.   |..|...|. .
 Worm   268 --------AKRKLTTRPRTTRMLVIILLLCVMVELPMGILNLCVAIYGEEFGNRYYDPVGNLM-E 323

  Fly   321 ILSHLNSAVNPVLYA----YHLKDFRAAL-----KNLLLKMMGVDIDQQAEAIHRFSVASQHRLQ 376
            :|:.|.|:|:.|||.    .:|..|||..     ||.|            ....|   :..||..
 Worm   324 MLTLLYSSVSFVLYCTMSNEYLSTFRALFFPWTRKNSL------------RGTRR---SWNHRHD 373

  Fly   377 SMDSNMRS-----TQPRLYVG 392
            ....:.|:     |.|..|||
 Worm   374 DETKSPRTFLINRTAPSSYVG 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 45/204 (22%)
7tm_1 58..334 CDD:278431 67/318 (21%)
egl-6NP_001257033.1 7tmA_FMRFamide_R-like 35..348 CDD:320109 73/347 (21%)
TM helix 1 35..61 CDD:320109 8/28 (29%)
TM helix 2 67..92 CDD:320109 4/24 (17%)
TM helix 3 111..141 CDD:320109 11/29 (38%)
TM helix 4 154..174 CDD:320109 5/20 (25%)
TM helix 5 212..237 CDD:320109 6/36 (17%)
TM helix 6 273..303 CDD:320109 7/29 (24%)
TM helix 7 316..341 CDD:320109 9/25 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.