DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and srw-117

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_503812.1 Gene:srw-117 / 183444 WormBaseID:WBGene00005864 Length:372 Species:Caenorhabditis elegans


Alignment Length:336 Identity:62/336 - (18%)
Similarity:118/336 - (35%) Gaps:134/336 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SFEGPLLPLHAATTSKDAKDSDSPSSELNIPY--------------TVFEVLVAIVSIIGNVLVI 63
            :||...:|...:..|..::.|.| |..:||.:              .:....||:..|..|...|
 Worm    26 NFEKNFIPFSYSFQSYSSEISVS-SILINIVHVFILTRKPMRTSSINILMAAVALFDIFTNFQQI 89

  Fly    64 -IVFRRERKL--------------------------RRRTNYYIVSLA-MADLLVGALGIPF-AI 99
             |:|.|...:                          ||.:.::|||:| |..|:|..   |. :.
 Worm    90 EIIFERNTSIFFECFPTDTYGVILTRAIFDIVNDYSRRCSTWFIVSIAFMRTLMVRN---PLHST 151

  Fly   100 LASMGLPRNLHACLFTVSLLVV--LCTISIFCLVAVSVDRYWAILYPMAYSRNVRTRTAIFIIS- 161
            ..|:|.|        ..|::|:  :|..|:    .:|:.:::              .|..|::: 
 Worm   152 YQSLGNP--------NASVIVISGVCAASL----PISIFKFF--------------ETQFFVVTE 190

  Fly   162 ---MCWVAGTIVGFLPLFGWHADVNHNQECLFVE----VMDYNYLVFLYFATIITPALLMLAFYT 219
               :|.:.||.        :.|.::|    .|::    :..| :.:|..|.:.|.|.||:     
 Worm   191 SLYVCALQGTY--------YLAAMSH----FFMKNNGFIAKY-FSLFNSFVSDIIPCLLL----- 237

  Fly   220 HIYRVIIKQVRQIVTMNPASDL--SRRSSAAVVQVTTPGRGGHTGTMLRVLGAARKRDVKATQNL 282
                       .|||:....||  :.:..|.:|.|                  :.|.:.::...|
 Worm   238 -----------PIVTVLLVMDLWKTAKKRANIVSV------------------SNKNNFRSKTGL 273

  Fly   283 --SIIVLFFMI 291
              .:.::||::
 Worm   274 VFCVTIMFFLV 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 40/206 (19%)
7tm_1 58..334 CDD:278431 50/277 (18%)
srw-117NP_503812.1 7TM_GPCR_Srw 53..348 CDD:370978 55/308 (18%)
TM helix 2 71..93 CDD:320109 6/21 (29%)
TM helix 3 114..138 CDD:320109 5/23 (22%)
TM helix 4 163..179 CDD:320109 4/19 (21%)
TM helix 5 219..242 CDD:320109 9/39 (23%)
TM helix 6 271..294 CDD:320109 3/14 (21%)
TM helix 7 309..334 CDD:320109
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.