DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdoR and trhr-1

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_491990.1 Gene:trhr-1 / 183056 WormBaseID:WBGene00016265 Length:395 Species:Caenorhabditis elegans


Alignment Length:394 Identity:91/394 - (23%)
Similarity:167/394 - (42%) Gaps:95/394 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VAIVSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADLLVGALGIPFAILASMGLPRNLH----- 110
            ::::.::||:|||.|..:.|.::..||.|:||||.:|.|.....:|..::..:| |.:.:     
 Worm    42 ISVIGVLGNLLVITVVLKVRGMKTPTNCYLVSLAASDTLFFFASMPHEMMYLLG-PNDHYLFGSL 105

  Fly   111 ACLFTVSLLVVLCTISIFCLVAVSVDRYWAILYPMAYSRNVRTRTAIFIISMCWVAGTIVGFLPL 175
            .|:....|..:....|...::|.:::||:.|..|.........:.|..||...|:      |..|
 Worm   106 GCVLLTYLPYLAMNTSSLSILAFTIERYYGICNPYKARTMCTVKRATCIICGIWI------FSML 164

  Fly   176 FGWHADVNHNQECLFVEVMDYNYLVFLYFATII-----TPALLMLAFYTHIYRV----------- 224
            :                   ::|.:||  ||:|     |.....|...:|.|::           
 Worm   165 Y-------------------HSYWLFL--ATLIKDDIGTSCSFRLERNSHAYKIVFLLDFVLWYV 208

  Fly   225 ------IIKQVRQIVTMNPASDLSRRS------SAAVVQ---VTTPGRGGHTGTMLRVLG---AA 271
                  ||...:..:|::...|..::|      :..:|:   .::...|.::|....:.|   :|
 Worm   209 LPIMCDIIIYAKIGITLSQCGDKIKKSVKPKIPNEVIVEKSKTSSTSMGHYSGRDSHISGKRNSA 273

  Fly   272 RKRDVKATQNLSIIVLFFMICWIPLYTINCIKAF--------CPDCYVHPKLTLFCIILSHLNSA 328
            :.|: :..:.|:|:|..|.:||:|...:....:|        .||.|::...||..|     |.|
 Worm   274 KGRN-QVVKMLAIVVAVFAVCWLPYRGMVVYNSFVSDPKYSWSPDWYINLSKTLVFI-----NCA 332

  Fly   329 VNPVLYAYHLKDFRAALKNLLLKMMGVDIDQQAEAIHRFSVASQHRLQSMDSNMRSTQPRLYVGE 393
            :||:||......||||.::||.|       ::.......::..:|||.:||. |.|.:|:     
 Worm   333 INPILYNLMSARFRAAFRSLLSK-------RKNSGFKSTALNQRHRLNTMDI-MSSAEPK----- 384

  Fly   394 YSPI 397
             ||:
 Worm   385 -SPL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 41/177 (23%)
7tm_1 58..334 CDD:278431 72/322 (22%)
trhr-1NP_491990.1 7tmA_TRH-R 33..349 CDD:320126 77/340 (23%)
TM helix 1 35..59 CDD:320126 6/16 (38%)
TM helix 2 68..90 CDD:320126 9/21 (43%)
TM helix 3 108..130 CDD:320126 3/21 (14%)
TM helix 4 153..169 CDD:320126 5/40 (13%)
TM helix 5 196..219 CDD:320126 2/22 (9%)
TM helix 6 277..302 CDD:320126 7/25 (28%)
TM helix 7 317..342 CDD:320126 11/29 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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