DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and Rxfp2

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:XP_011239323.1 Gene:Rxfp2 / 140498 MGIID:2153463 Length:740 Species:Mus musculus


Alignment Length:453 Identity:100/453 - (22%)
Similarity:179/453 - (39%) Gaps:115/453 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAFRYFSITDFSFEGPLLPLHAATTSKDAKDSDSPSSEL--NIPYTVFEVLVAIVSIIGNVLVI 63
            :..|||.|..      |.:.:...:|     |..|.|.:|  |....|...::|.::.:||.|||
Mouse   370 LKTFRYCSYV------PHVRICMPST-----DGISSSEDLLANGILRVSVWVIAFITCVGNFLVI 423

  Fly    64 IVFRRERKLRRRTN----YYIVSLAMADLLVG----ALGI----------PFAILASMGLPRNLH 110
            .|    |.|.:..|    ..|..|..||.|:|    ::|:          .:|:|....:|..|.
Mouse   424 AV----RSLIKAENTTHAMSIKILCCADCLMGVYLFSVGVFDIKYRGQYQKYALLWMESVPCRLL 484

  Fly   111 ACLFTVSLLVVLCTISIFCLVAVSVDRYWAILYPMAYSRNVRTRTAIFIISMCWVAGTIVGFLPL 175
            ..|.|:|     ..:|:..|..::::::..|::|.:..|..:.:||:.:.|: ||.|.::..:|.
Mouse   485 GFLATLS-----TEVSVLLLTFLTLEKFLVIVFPFSNLRLGKRQTAVALASI-WVVGFLIAAVPF 543

  Fly   176 -----FGWHADVN------HNQECLFVEVMDYNYLVFLYFATIITPALLMLAFYTHIYRVIIKQV 229
                 ||.....|      |..:........|:..:||        .:.:|||..    ::|..|
Mouse   544 TREDYFGNFYGKNGVCFPLHYDQAEDFGSRGYSLGIFL--------GVNLLAFLV----IVISYV 596

  Fly   230 RQIVTMNPASDLSRRSSAAVVQVTTPGRGGHTGTMLRVLGAARKRDVKATQNLSIIVLFFMICWI 294
            ....:::       :::....:|.:     |.|           ::|........||....||||
Mouse   597 TMFCSIH-------KTALQTAEVRS-----HIG-----------KEVAVANRFFFIVFSDAICWI 638

  Fly   295 PLYTINCIKAFCPDCYVHPKLTLFCII-LSHLNSAVNPVLYAYHLKDFRAALKNLLLKMMGVDID 358
            |::.:..:...  ...:...:|.:.:: ...:|||:||:||......|:..||.||.|       
Mouse   639 PVFVVKILSLL--QVEIPGTITSWIVVFFLPVNSALNPILYTLTTSFFKDKLKQLLHK------- 694

  Fly   359 QQAEAIHRFSVASQHRLQSMDSNMRST-QPRLYVGEYSPIWLRQQQEALKNSQLLPKCGVVSP 420
                  ||.....:.:.:|:.:::..| :..|.:|..|.|       ||.:|.:.|    |||
Mouse   695 ------HRRKPIFKVKKKSLSASIVWTDESSLKLGVLSKI-------ALGDSIMKP----VSP 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 46/196 (23%)
7tm_1 58..334 CDD:278431 64/305 (21%)
Rxfp2XP_011239323.1 LDLa 31..66 CDD:238060
LRR 104..353 CDD:227223
leucine-rich repeat 125..148 CDD:275380
LRR_8 148..207 CDD:338972
leucine-rich repeat 149..172 CDD:275380
leucine-rich repeat 173..196 CDD:275380
leucine-rich repeat 197..220 CDD:275380
leucine-rich repeat 221..244 CDD:275380
leucine-rich repeat 245..268 CDD:275380
leucine-rich repeat 269..292 CDD:275380
leucine-rich repeat 293..316 CDD:275380
leucine-rich repeat 317..340 CDD:275380
leucine-rich repeat 341..360 CDD:275380
7tm_GPCRs 403..688 CDD:391938 69/331 (21%)
TM helix 1 403..429 CDD:341315 9/29 (31%)
TM helix 2 436..461 CDD:341315 7/24 (29%)
TM helix 3 481..511 CDD:341315 6/34 (18%)
TM helix 4 522..544 CDD:341315 7/22 (32%)
TM helix 5 572..601 CDD:341315 8/40 (20%)
TM helix 6 617..647 CDD:341315 9/40 (23%)
TM helix 7 656..681 CDD:341315 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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