DRSC/TRiP Functional Genomics Resources

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Protein Alignment AdoR and chrm1

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:XP_004913717.1 Gene:chrm1 / 100490434 XenbaseID:XB-GENE-22061118 Length:521 Species:Xenopus tropicalis


Alignment Length:465 Identity:107/465 - (23%)
Similarity:167/465 - (35%) Gaps:166/465 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YTVFEV--------LVAIVSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADLLVGALGI----P 96
            :.|:||        ::::|::||||||::.|:....|:...||:::|||.||:::|||.:    .
 Frog    42 HAVWEVVLIVITTGILSLVTVIGNVLVLLAFKVNSDLKTVNNYFLLSLACADIIIGALSMNLYTT 106

  Fly    97 FAILASMGLPRNLHACLFTVSLLVVLCTISIFCLVAVSVDRYWAILYPMAYSRNVRTRTAIFIIS 161
            :.::....|  ...:|...::|..|....|:..|:.:|.|||::|..|:.|......|.|..:|.
 Frog   107 YIVMGRWAL--GPVSCDLWLALDYVASNASVMNLLIISFDRYFSITRPLTYRAKRTPRRAAIMIG 169

  Fly   162 MCWVAGTIVGFLPLFGWHADVNHNQECLFVEVMDYNYLVF-----LYFATIIT----PALLMLAF 217
            |.|....::....:..|...|....    ||..|. |:.|     :.|.|.|.    |..:|:..
 Frog   170 MAWFISFVLWAPAIIFWQYIVGERT----VEATDC-YIQFFSQPIITFGTAIAAFYLPVTIMIIL 229

  Fly   218 YTHIYRVIIKQVRQI-------------------------------------------------- 232
            |..:||....:.:::                                                  
 Frog   230 YWRVYRETENRSKELAGLQGSGTDHTSHPLALGSVRSGSSSGAGESERLSRGQRTVPRAKQGCCF 294

  Fly   233 ---VTMNP----------------------ASDLSRRSSA------------AVVQ-------VT 253
               :|.||                      |..||..|.|            ||::       |.
 Frog   295 PRQLTSNPSLRSYPEHRSNGSCNTMEDAASADSLSSSSEAEDRPYEMKNICSAVIRLPMVSSVVG 359

  Fly   254 TP----------GRG-------GHTGTMLRVLGAA---------------------RK-----RD 275
            ||          |||       |....:.|....|                     ||     ::
 Frog   360 TPKGSRGSSDTLGRGDIEAETNGGKSEVTRKTSRAQVTALPSTIIRAKSEKNHHGKRKSNSLIKE 424

  Fly   276 VKATQNLSIIVLFFMICWIPLYTINCIKAFCPDCYVHPKLTLFCIILSHLNSAVNPVLYAYHLKD 340
            .||.:.||.|:|.|::.|.|...:..:..||||| |..||......|.::||.|||:.||...:.
 Frog   425 KKAAKTLSAILLAFILTWTPYNIMVLVSTFCPDC-VPKKLWELGYWLCYVNSTVNPMCYALCNRS 488

  Fly   341 FRAALKNLLL 350
            ||...|.|||
 Frog   489 FRRTFKMLLL 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 50/180 (28%)
7tm_1 58..334 CDD:278431 94/425 (22%)
chrm1XP_004913717.1 7tmA_mAChR_M1 48..493 CDD:341356 100/452 (22%)
TM helix 1 49..75 CDD:341356 8/25 (32%)
TM helix 2 82..108 CDD:341356 10/25 (40%)
TM helix 3 120..150 CDD:341356 9/29 (31%)
TM helix 4 162..185 CDD:341356 5/22 (23%)
TM helix 5 207..236 CDD:341356 7/28 (25%)
TM helix 6 422..452 CDD:341356 9/29 (31%)
TM helix 7 461..486 CDD:341356 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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