DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and gpr12

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:XP_002931838.2 Gene:gpr12 / 100488444 XenbaseID:XB-GENE-5793163 Length:340 Species:Xenopus tropicalis


Alignment Length:326 Identity:82/326 - (25%)
Similarity:138/326 - (42%) Gaps:46/326 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TTSKDAKDSD-SPSSELNIPYTVFEVLVAIVSIIGNVLVIIVFRRERKLRRRTNYYIVSLAMADL 88
            |.|.....|| ||...:| |:.:...:...|....|.:||.:......||......|.|||:|||
 Frog    34 TNSSTVTTSDLSPDESVN-PWDIILCVTGTVMACENAIVIAILFYTPSLRAPMFILIGSLALADL 97

  Fly    89 LVGALGIPFAILASMGLPRNLHACLFTVSLLVVLCTISIFCLVAVSVDRYWAILYPMAYSRNVRT 153
            |.| ||:....:........| |.|.:..||:...:.|:..|:|:::|||.::...:.| ...||
 Frog    98 LAG-LGLIVNFIVIYVFNSEL-ATLSSTGLLLAAFSASVCSLLAITLDRYLSLYNALTY-HTERT 159

  Fly   154 RTAIF-IISMCWVAGTIVGFLPLFGWHADVNHNQECLFVEVMDYNYLVFLYFATIITPALLMLAF 217
            .|..: ::.:.|.....:|.||:.||:. |.....|..:..:..|....|..:.::..| ||:..
 Frog   160 LTFTYTMLILLWALCICIGLLPIMGWNC-VREPSSCSVLRPVTKNNAAVLAVSFLLLFA-LMMQL 222

  Fly   218 YTHIYRVIIKQVRQIVTMNPASDLSRRSSAAVVQVTTPGRGGHTGTMLRVLGAARKRDVKATQNL 282
            |..|.|:..:..:||...:.....|:.||..                            |....|
 Frog   223 YLQICRIAFRHAQQIAVQHQFMATSQASSTR----------------------------KGVSTL 259

  Fly   283 SIIVLFFMICWIP--LYTINCIKAFCPDCYVHPKLTLFCIIL-SHLNSAVNPVLYAYHLKDFRAA 344
            |:|:..|.:||||  :|::....::       |....:|::| :..||.:||::||:...|.:.:
 Frog   260 SLILGTFALCWIPFAVYSLIADSSY-------PMTYTYCLVLPAACNSVINPIIYAFRNPDIQKS 317

  Fly   345 L 345
            |
 Frog   318 L 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 46/168 (27%)
7tm_1 58..334 CDD:278431 69/279 (25%)
gpr12XP_002931838.2 7tmA_GPR185-like 51..318 CDD:320626 75/307 (24%)
TM helix 1 53..77 CDD:320626 4/23 (17%)
TM helix 2 86..107 CDD:320626 11/21 (52%)
TM helix 3 120..142 CDD:320626 6/21 (29%)
TM helix 4 165..181 CDD:320626 2/15 (13%)
TM helix 5 201..224 CDD:320626 5/23 (22%)
TM helix 6 256..278 CDD:320626 9/21 (43%)
TM helix 7 286..311 CDD:320626 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.