DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AdoR and avpr2

DIOPT Version :9

Sequence 1:NP_651772.1 Gene:AdoR / 43583 FlyBaseID:FBgn0039747 Length:774 Species:Drosophila melanogaster
Sequence 2:XP_004916778.1 Gene:avpr2 / 100487051 XenbaseID:XB-GENE-482287 Length:361 Species:Xenopus tropicalis


Alignment Length:363 Identity:83/363 - (22%)
Similarity:141/363 - (38%) Gaps:59/363 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TDFSFEGPLLPLHAATTSKDAKDSDSPSSELNIPYTVFEVLVAIV---SIIGNVLVIIVFRRERK 71
            |..:||.|.:     |...:....|...::.||      .::|::   :..||.||:....|.||
 Frog     4 TQPTFETPNI-----TVGVEEDKRDPIVAQWNI------AMLAVIFSFATFGNCLVLFTLLRRRK 57

  Fly    72 LRRRTNYYIVSLAMADLLVGALGIPFAILASMGLPRNLH-----------ACLFTVSLLVVLCTI 125
            .....:.:::.|.:|||:|....:         ||:.:.           .|.....|.||....
 Frog    58 HNALMHTFMIHLCLADLVVSFFQV---------LPQLVWDITDRFRGPDVLCRGVRYLQVVGMYA 113

  Fly   126 SIFCLVAVSVDRYWAILYPMAYSRNVRTRTAIFIISMCWVAGTIV----GFL-PLFGWHADVNHN 185
            |.:.:||::.||:.||..||...:....|..| .:|:.|:|..|.    ||: .....|..|   
 Frog   114 SSYMIVAMTFDRHQAICRPMMTFKKGSARWNI-PVSLAWLASAIFSLPQGFIFSRIEVHPGV--- 174

  Fly   186 QEC--LFVEVMDYN-YLVFLYFATIITPALLMLAFYTHIYRVIIKQVRQIVTMNPASDLSRRSSA 247
            .:|  .|:|..... |:.::..|..|.|||.:......|:|    ::...:.|.|......|..|
 Frog   175 FDCWATFIEPWGLKAYVTWITLAVFILPALFIATCQVLIFR----EIHNSINMGPGHSPRPRRKA 235

  Fly   248 AVVQVTTPGRG-GHTGTMLRVLGAARKRDVKATQNLSIIVLFFMICWIPLYTINCIKAFCPDCYV 311
            .::......|. ..||     :.:|..:.|:.|   .:|||.:::||.|.:.......:..:...
 Frog   236 KLINTRNGARSQSDTG-----VSSAMAKTVRMT---LVIVLVYVVCWAPFFIAQLWNVWNQESAA 292

  Fly   312 HPKLTLFCIILSHLNSAVNPVLYAYHLKDFRAALKNLL 349
            ........:||:.|||..||.:|..........:|.:|
 Frog   293 GSSAIKVLMILASLNSCTNPWIYTIFSSSVSKDVKEIL 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AdoRNP_651772.1 7tm_4 52..>220 CDD:304433 47/189 (25%)
7tm_1 58..334 CDD:278431 71/295 (24%)
avpr2XP_004916778.1 7tmA_V2R 31..325 CDD:320510 74/324 (23%)
TM helix 1 31..55 CDD:320510 6/29 (21%)
TM helix 2 62..89 CDD:320510 7/35 (20%)
TM helix 3 100..130 CDD:320510 10/29 (34%)
TM helix 4 142..163 CDD:320510 6/21 (29%)
TM helix 5 187..216 CDD:320510 8/32 (25%)
TM helix 6 254..284 CDD:320510 9/32 (28%)
TM helix 7 294..319 CDD:320510 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.