DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpi and TIM

DIOPT Version :9

Sequence 1:NP_788764.1 Gene:Tpi / 43582 FlyBaseID:FBgn0086355 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001323967.1 Gene:TIM / 816652 AraportID:AT2G21170 Length:315 Species:Arabidopsis thaliana


Alignment Length:292 Identity:149/292 - (51%)
Similarity:194/292 - (66%) Gaps:15/292 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VFPKLFKCQWKTYEGQKKFY-ANFSTDCTDSNSNNM-----------SRKFCVGGNWKMNGDQKS 120
            :.|||......::  |..|: .|.||....|:|::.           |.||.||||||.||.:.|
plant    18 ISPKLDAAAVSSH--QSFFHRVNSSTRLVSSSSSSHRSPRGVVAMAGSGKFFVGGNWKCNGTKDS 80

  Fly   121 IAEIAKTLSSAALDPNTEVVIGCPAIYLMYARNLLPCELGLAGQNAYKVAKGAFTGEISPAMLKD 185
            ||::...|:||.|:.:.:||:..|.:|:...::.|...:.::|||::....||||||||...|||
plant    81 IAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKD 145

  Fly   186 IGADWVILGHSERRAIFGESDALIAEKAEHALAEGLKVIACIGETLEEREAGKTNEVVARQMCAY 250
            :|..||||||||||.:.||.|..|.:||.:||:|||.|||||||.|||||||||.:|...|:.|:
plant   146 LGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAF 210

  Fly   251 AQKIKDWKNVVVAYEPVWAIGTGQTATPDQAQEVHAFLRQWLSDNISKEVSASLRIQYGGSVTAA 315
            |..:..|.|:|||||||||||||:.|:|.||||||..:|.||..|:|:||::..||.|||||...
plant   211 ADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGG 275

  Fly   316 NAKELAKKPDIDGFLVGGASLK-PEFVDIINA 346
            |:.||||:.||||||||||||| |||..|:|:
plant   276 NSAELAKEEDIDGFLVGGASLKGPEFATIVNS 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpiNP_788764.1 PTZ00333 102..346 CDD:240365 138/255 (54%)
TIMNP_001323967.1 PLN02429 1..315 CDD:166070 149/292 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 271 1.000 Domainoid score I438
eggNOG 1 0.900 - - E1_COG0149
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 278 1.000 Inparanoid score I885
OMA 1 1.010 - - QHG62471
OrthoDB 1 1.010 - - D1272577at2759
OrthoFinder 1 1.000 - - FOG0002444
OrthoInspector 1 1.000 - - otm3020
orthoMCL 1 0.900 - - OOG6_100657
Panther 1 1.100 - - O PTHR21139
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1627
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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