DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tpi and Tpi1

DIOPT Version :9

Sequence 1:NP_788764.1 Gene:Tpi / 43582 FlyBaseID:FBgn0086355 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_075211.2 Gene:Tpi1 / 24849 RGDID:3896 Length:249 Species:Rattus norvegicus


Alignment Length:246 Identity:160/246 - (65%)
Similarity:187/246 - (76%) Gaps:0/246 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SRKFCVGGNWKMNGDQKSIAEIAKTLSSAALDPNTEVVIGCPAIYLMYARNLLPCELGLAGQNAY 167
            ||||.|||||||||.:|.:.|:..||::|.|..:||||...|..|:.:||..|..::.:|.||.|
  Rat     4 SRKFFVGGNWKMNGRKKCLGELICTLNAAKLPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCY 68

  Fly   168 KVAKGAFTGEISPAMLKDIGADWVILGHSERRAIFGESDALIAEKAEHALAEGLKVIACIGETLE 232
            ||..|||||||||.|:||:||.||:|||||||.||||||.||.:|..|||:|||.|||||||.|:
  Rat    69 KVTNGAFTGEISPGMIKDLGATWVVLGHSERRHIFGESDELIGQKVNHALSEGLGVIACIGEKLD 133

  Fly   233 EREAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGQTATPDQAQEVHAFLRQWLSDNIS 297
            |||||.|.:||..|..|.|..:|||..||:|||||||||||:||||.||||||..||.||..|:|
  Rat   134 EREAGITEKVVFEQTKAIADNVKDWCKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKCNVS 198

  Fly   298 KEVSASLRIQYGGSVTAANAKELAKKPDIDGFLVGGASLKPEFVDIINARQ 348
            :.|:...||.||||||.|..||||.:||:||||||||||||||||||||:|
  Rat   199 EGVAQCTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpiNP_788764.1 PTZ00333 102..346 CDD:240365 157/242 (65%)
Tpi1NP_075211.2 PTZ00333 2..247 CDD:240365 157/242 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340324
Domainoid 1 1.000 309 1.000 Domainoid score I1287
eggNOG 1 0.900 - - E1_COG0149
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 322 1.000 Inparanoid score I2424
OMA 1 1.010 - - QHG62471
OrthoDB 1 1.010 - - D1272577at2759
OrthoFinder 1 1.000 - - FOG0002444
OrthoInspector 1 1.000 - - otm46325
orthoMCL 1 0.900 - - OOG6_100657
Panther 1 1.100 - - LDO PTHR21139
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1627
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

Return to query results.
Submit another query.