DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tpi and tpi1a

DIOPT Version :9

Sequence 1:NP_788764.1 Gene:Tpi / 43582 FlyBaseID:FBgn0086355 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_705953.1 Gene:tpi1a / 192309 ZFINID:ZDB-GENE-020416-3 Length:248 Species:Danio rerio


Alignment Length:245 Identity:163/245 - (66%)
Similarity:191/245 - (77%) Gaps:0/245 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SRKFCVGGNWKMNGDQKSIAEIAKTLSSAALDPNTEVVIGCPAIYLMYARNLLPCELGLAGQNAY 167
            ||||.||||||||||::|:.|:..||::|:|:..|:||.|.|:|||.|||:.|...:|:|.||.|
Zfish     3 SRKFFVGGNWKMNGDKESLGELIMTLNTASLNDKTDVVCGAPSIYLDYARSKLDQRIGVAAQNCY 67

  Fly   168 KVAKGAFTGEISPAMLKDIGADWVILGHSERRAIFGESDALIAEKAEHALAEGLKVIACIGETLE 232
            ||.||||||||||||:||.|.|||||||||||.:|||||.||.:|..|.|...|.|||||||.||
Zfish    68 KVPKGAFTGEISPAMIKDCGIDWVILGHSERRHVFGESDELIGQKVAHCLESDLGVIACIGEKLE 132

  Fly   233 EREAGKTNEVVARQMCAYAQKIKDWKNVVVAYEPVWAIGTGQTATPDQAQEVHAFLRQWLSDNIS 297
            |||||.|.:||..|....|..:|||..||:|||||||||||:||:|:||||||..||:||..|:|
Zfish   133 EREAGTTEDVVFEQTKVIADNVKDWTRVVLAYEPVWAIGTGKTASPEQAQEVHEKLREWLRANVS 197

  Fly   298 KEVSASLRIQYGGSVTAANAKELAKKPDIDGFLVGGASLKPEFVDIINAR 347
            ..|:.|:||.||||||..|.||||.:.|:|||||||||||||||||||||
Zfish   198 DAVADSVRIIYGGSVTGGNCKELAAQADVDGFLVGGASLKPEFVDIINAR 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpiNP_788764.1 PTZ00333 102..346 CDD:240365 160/242 (66%)
tpi1aNP_705953.1 PTZ00333 1..246 CDD:240365 160/242 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580151
Domainoid 1 1.000 323 1.000 Domainoid score I1185
eggNOG 1 0.900 - - E1_COG0149
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128432
Inparanoid 1 1.050 333 1.000 Inparanoid score I2407
OMA 1 1.010 - - QHG62471
OrthoDB 1 1.010 - - D1272577at2759
OrthoFinder 1 1.000 - - FOG0002444
OrthoInspector 1 1.000 - - otm24832
orthoMCL 1 0.900 - - OOG6_100657
Panther 1 1.100 - - O PTHR21139
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1539
SonicParanoid 1 1.000 - - X1627
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.