DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppi1 and Krt28

DIOPT Version :10

Sequence 1:NP_733345.2 Gene:Ppi1 / 43581 FlyBaseID:FBgn0051025 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001402629.1 Gene:Krt28 / 360623 RGDID:1309530 Length:462 Species:Rattus norvegicus


Alignment Length:248 Identity:43/248 - (17%)
Similarity:79/248 - (31%) Gaps:93/248 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 IVQKLNMPGRDFECQ------DKLQIKANVCRGCKI--CLGSSSINV--NCLP-------LN--- 152
            ::.:|.:...|.|.|      :...:|.|.....|:  |....::||  |..|       ||   
  Rat   197 VLDELTLCRTDQELQYESLSEEMTYLKKNHEEEMKVLQCAAGGNVNVEMNAAPGVDLTVLLNNMR 261

  Fly   153 -------------PDKTFQMEAECLQRQLAEGINIS------VVYLRKEI--------------- 183
                         .:..||.::..||:|::..:..:      :..|::.:               
  Rat   262 AEYEALAEQNRRDAEAWFQEKSATLQQQISNDLGAATSARTELTELKRSLQTLEIELQSLSATKH 326

  Fly   184 --------ARGCYFPPAAVVSRMINDFDEIVHDANVELTCKGCTVG-------IMNIRFAMQMRC 233
                    ..|.|....|.:...|:..:|.:|....|      |.|       :::|:..::...
  Rat   327 SLECTLAETEGNYCSQLAQIQAQISALEEQLHQVRTE------TEGQKLEHEQLLDIKAHLEKEI 385

  Fly   234 QTLKEDAVDGRLAGGQERGCFP----------NMNVDLQDLSFMST--SSIDP 274
            :|.      .||.||.|..|..          |.:.|:...:.:.|  ..|||
  Rat   386 ETY------CRLIGGDENSCSSSKGFESGTSGNSSKDVSKTTLVKTVVEEIDP 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppi1NP_733345.2 DUF4788 108..>294 CDD:406440 43/248 (17%)
DUF4776 371..848 CDD:406413
Krt28NP_001402629.1 Filament 83..397 CDD:459643 35/211 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.