DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppi1 and Krt35

DIOPT Version :9

Sequence 1:NP_733345.2 Gene:Ppi1 / 43581 FlyBaseID:FBgn0051025 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_001008820.1 Gene:Krt35 / 287697 RGDID:1305300 Length:455 Species:Rattus norvegicus


Alignment Length:558 Identity:98/558 - (17%)
Similarity:172/558 - (30%) Gaps:184/558 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 GRLAGGQERGCFPNMNVDLQDLSFMSTSSIDPCVGFMPSDTEVAQDSPPCSEDRAQDSFQCQDSP 307
            |:..||..|            :|.|.:||  .|.  :||.:..|:....||....:.:::.....
  Rat    19 GKAGGGSTR------------MSRMYSSS--SCK--LPSPSRGARSFSVCSAGLGRGNYRLSSCL 67

  Fly   308 PRLIDMAGPYPVYSCPNVDDDCVTFEPPAGPATQFSSCQKNVLGEGNANRLCQKHSSPRLRQMHI 372
            |.|                  |:   |..|.||.: |......|||                   
  Rat    68 PAL------------------CL---PTGGFATGY-SMGGGWFGEG------------------- 91

  Fly   373 SNTRSCVLCGEDVSWLPKVAACPCCGYKPVPEFKERPYDEQATAQQI---LLDHLEN----PVEN 430
                  :|.|                            :|:.|.|.:   |..:||.    ..||
  Rat    92 ------ILTG----------------------------NEKETMQSLNDRLASYLEKVRQLEQEN 122

  Fly   431 LSFDMGSVEGCSANEEHGVPEPTSEAFEAIVKDYQLLRRSIRESNTKATQSATKNP--------- 486
            .|.:....|.|    |..||        .:..|||...|::.|...|...|..:|.         
  Rat   123 ASLESRIREWC----EQQVP--------YMCPDYQSYFRTMEELQKKTLCSKAENARLVVQIDNA 175

  Fly   487 --------TAQEGSAQPQDLAKV----FTELRDLFNVKAADENQKIQDICAEACALAKSHKKSKN 539
                    |..|.....:.|.:.    ...:.|...:..||...:::.:..|...|.|:|::..|
  Rat   176 KLAADDFRTKYETEVSLRQLVEADINGLRRILDDLTLCKADLEAQVESLKEELLCLKKNHEEEVN 240

  Fly   540 RPASPERTKAGKTDPVEDACETPRKMKKRRPKVKRPYKS------RYYSMYRPTERPKANVAIPD 598
                ..|.:.|....||.....|..:.:...:::..|::      |....:..|:..:.|..:..
  Rat   241 ----SLRCQLGDRLNVEVDAAPPVDLNRVLDEMRCQYETLVENNRRDAEDWYDTQTEELNQQVVT 301

  Fly   599 ADKKVPSHMGWLWTAHPLANKPGWRPGAIRRSIRGL-----MSYFLKDFPVDNVPVSKYMSYYKH 658
            :.:::.|....:.              .:||::..|     ....::| .:|:. :::..:.|..
  Rat   302 SSEQLQSCQSDII--------------ELRRTVNSLEIELQAQQSMRD-ALDST-LAETEARYSS 350

  Fly   659 KMSPM--------SPPGEKAEDLVQVPTLHIEKKNDVYTITLRPLKDAKT-LARSANPY-VRMKP 713
            :::.|        |..||...||        |::|..|.:.|    |.:. |....|.| ..::.
  Rat   351 QLAQMQCLIGSVESQLGEIRADL--------ERQNQEYQVLL----DVRARLECEINTYRGLLES 403

  Fly   714 VQFRIVKNPLLKEIRDLKRCLKGMGFSKCSCHKPLMNC 751
            ...::..||...:....|.||..:....||.......|
  Rat   404 EDSKLPCNPCAPDYSPSKSCLPCLPAVSCSTGAARTTC 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppi1NP_733345.2 DUF4788 108..>294 CDD:292651 13/50 (26%)
DUF4776 371..848 CDD:292622 73/430 (17%)
Krt35NP_001008820.1 Filament 96..407 CDD:278467 63/354 (18%)
MIT_CorA-like <192..>334 CDD:294313 22/159 (14%)
DUF5082 305..408 CDD:293493 21/130 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28M49
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.