DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppi1 and Krt19

DIOPT Version :9

Sequence 1:NP_733345.2 Gene:Ppi1 / 43581 FlyBaseID:FBgn0051025 Length:998 Species:Drosophila melanogaster
Sequence 2:NP_032497.1 Gene:Krt19 / 16669 MGIID:96693 Length:403 Species:Mus musculus


Alignment Length:96 Identity:22/96 - (22%)
Similarity:45/96 - (46%) Gaps:5/96 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   458 EAIVKDYQLLRRSIRESNTKATQSATKNPTAQEGSAQPQDLAKVFTELRDLFNVKAADENQKIQD 522
            |::.::...|:::..|..|..........:.:..|....||||:.:|:|..:.: .|::|:|   
Mouse   208 ESLKEELAYLKKNHEEEITALRSQVGGQVSVEVDSTPGVDLAKILSEMRSQYEI-MAEKNRK--- 268

  Fly   523 ICAEACALAKSHKKSKNRPASPERTKAGKTD 553
             .|||..||:..:.:.......|:.:..||:
Mouse   269 -DAEATYLARIEELNTQVAVHSEQIQISKTE 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppi1NP_733345.2 DUF4788 108..>294 CDD:292651
DUF4776 371..848 CDD:292622 22/96 (23%)
Krt19NP_032497.1 Head 1..82
Filament 82..393 CDD:278467 22/96 (23%)
Coil 1A 83..118
Linker 1 119..136
Coil 1B 137..228 4/19 (21%)
Prefoldin 182..307 CDD:238453 22/96 (23%)
Linker 12 229..251 4/21 (19%)
BAR 247..>402 CDD:299863 17/57 (30%)
Necessary for interaction with PNN. /evidence=ECO:0000250 247..393 17/57 (30%)
Coil 2 252..390 13/52 (25%)
Rod-like helical tail 391..403
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28M49
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.