Sequence 1: | NP_001287599.1 | Gene: | sima / 43580 | FlyBaseID: | FBgn0266411 | Length: | 1593 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296971.1 | Gene: | hif1ab / 393202 | ZFINID: | ZDB-GENE-040426-706 | Length: | 777 | Species: | Danio rerio |
Alignment Length: | 754 | Identity: | 247/754 - (32%) |
---|---|---|---|
Similarity: | 377/754 - (50%) | Gaps: | 156/754 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 154 MNNEKRKEKSRDAARCRRSKETEIFMELSAALPLKTDDVNQLDKASVMRITIAFLKIREMLQFVP 218
Fly 219 SLRDCNDDIKQDIETAEDQQEVKPKLEVGTEDWLNGAEARELLKQTMDGFLLVLSHEGDITYVSE 283
Fly 284 NVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRL 348
Fly 349 KCTLTSRGRSINIKSASYKVIHITGHLVVNAKGE------------RLLMAIGRPIPHPSNIEIP 401
Fly 402 LGTSTFLTKHSLDMRFTYVDDKMHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKSVLSKGQGE 466
Fly 467 TSRYRFLGKYGGYCWILSQATIVYD--KLKPQSVVCVNYVISNLENKHEIYSLAQQTAASEQKEQ 529
Fly 530 HHQAAETEKEPEKAADPEIIAQETKETVNTPIHTSELQAKPLQLESEKAEKTIEETKTIATIPPV 594
Fly 595 TATSTADQIKQLPESNPYKQI-LQAELLIKRENHSPGPRTITAQLLSGSSSGLRPEEKRPKSVTA 658
Fly 659 SVLRPSPAPPLTPPPTAVLCKKTPLGVE--------PNLP-PTTTATAAIISSSNQQLQIAQQTQ 714
Fly 715 LQNPQQPAQ-------DMSKGFC-----SLFADDGRGLTMLKEEP-DDLSHHLASTNCIQLDEMT 766
Fly 767 PFSDMLVGLMGTCLLPEDINSLDSTTCSTTASGQHYQ----SPSSSSTSAPSNTSSSNNSYANSP 827
Fly 828 L--------SPLTPNSTATASNPSHQQQQQHHNQQQQQQ 858 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sima | NP_001287599.1 | HLH | 156..209 | CDD:238036 | 31/52 (60%) |
PAS | 256..392 | CDD:279347 | 58/147 (39%) | ||
PAS | 265..>317 | CDD:238075 | 26/51 (51%) | ||
PAS | 404..505 | CDD:238075 | 45/102 (44%) | ||
PAS_3 | 417..502 | CDD:285623 | 35/86 (41%) | ||
hif1ab | NP_001296971.1 | HLH | 14..74 | CDD:238036 | 34/68 (50%) |
PAS | 94..149 | CDD:214512 | 26/54 (48%) | ||
PAS | 239..338 | CDD:238075 | 41/98 (42%) | ||
PAS_3 | 254..339 | CDD:285623 | 34/84 (40%) | ||
HIF-1 | 543..574 | CDD:288296 | 7/42 (17%) | ||
HIF-1a_CTAD | 740..776 | CDD:285931 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170592834 | |
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I8333 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 1 | 1.000 | - | - | otm24521 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106128 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23043 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4976 |
SonicParanoid | 1 | 1.000 | - | - | X1038 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.870 |