Sequence 1: | NP_001287599.1 | Gene: | sima / 43580 | FlyBaseID: | FBgn0266411 | Length: | 1593 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023891.2 | Gene: | hif-1 / 180359 | WormBaseID: | WBGene00001851 | Length: | 721 | Species: | Caenorhabditis elegans |
Alignment Length: | 953 | Identity: | 210/953 - (22%) |
---|---|---|---|
Similarity: | 336/953 - (35%) | Gaps: | 322/953 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 155 NNEKRKEKSRDAARCRRSKETEIFMELSAALPL-KTDDVNQLDKASVMRITIAFLKIREMLQFVP 218
Fly 219 SLRDCNDDIKQDIETAEDQQEVKPKLEVGTEDWLNGAEARELLKQTMDGFLLVLSHEGDITYVSE 283
Fly 284 NVVEYLGITKIDTLGQQIWEYSHQCDHAEIKEALSLKRELAQKVKDEPQQNSGVSTHHRDLFVRL 348
Fly 349 KCTLTSRGRSINIKSASYKVIHITGHLVVNAKGERLLMAIGRPIPHPSNIEIPLGTST------- 406
Fly 407 -----------FLTKHSLDMRFTYVDDKMHDLLGYSPKDLLDTSLFSCQHGADSERLMATFKSVL 460
Fly 461 SKGQGETSRYRFLGKYGGYCWILSQATIVYDKLKPQS---VVCVNYVISNLENKHEIYSLAQQTA 522
Fly 523 ASEQKEQHHQAAETEKEPEKAAD-----PEIIAQETKETVN-TPIHTSELQAKPLQLESEKAEKT 581
Fly 582 IEETKTIATIPPVTATSTADQIKQLPESNPYKQILQAELLIKRENHSPGPRTITAQLLSGSSSGL 646
Fly 647 RPEEKRPKSVTASVLRPSPAPPLTPPPTAVLCKKTPLGVEPNLPPTTTATAAIISSSNQQLQIAQ 711
Fly 712 QTQLQNPQQPAQDMSKGFCSLFADDGRGLTMLKEEPDDLSHHLASTNCIQLDEMTPFSDMLVGLM 776
Fly 777 GTCLLPEDINSLDSTTCSTTASGQHYQSPSSSSTSAPSNTSSSNNSYANSPLSPLTP-------N 834
Fly 835 STATASNPSHQ-------QQQQHHNQQQQQQQQQQHHPQHHDNSNSSSNIDPLFNYREESNDTSC 892
Fly 893 SQHL-----------HSPSITSKSPEDSSLPSLCSPNSLTQEDDFSFEA--FAMRAPYIPIDDDM 944
Fly 945 PLLTETDLMWCPPEDLQTM--VPKEIDAIQQ------------------------QLQQLQQQHH 983
Fly 984 QQYAGNTGYQQQQQQPQLQQQHFSNSLCSSPASTVSSLSPSPV 1026 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sima | NP_001287599.1 | HLH | 156..209 | CDD:238036 | 21/53 (40%) |
PAS | 256..392 | CDD:279347 | 35/135 (26%) | ||
PAS | 265..>317 | CDD:238075 | 17/51 (33%) | ||
PAS | 404..505 | CDD:238075 | 35/121 (29%) | ||
PAS_3 | 417..502 | CDD:285623 | 26/87 (30%) | ||
hif-1 | NP_001023891.2 | HLH | 10..66 | CDD:238036 | 22/75 (29%) |
PAS | 94..>145 | CDD:238075 | 17/54 (31%) | ||
PAS | 233..>312 | CDD:238075 | 25/78 (32%) | ||
PAS_11 | 236..338 | CDD:291273 | 35/101 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 51 | 1.000 | Domainoid score | I7753 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 1 | 1.000 | - | - | otm14250 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106128 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23043 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4976 |
SonicParanoid | 1 | 1.000 | - | - | X1038 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.940 |