Protein Alignment spn-A and xrcc3

DIOPT Version :9

• Sequence 1: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001013559.1
• Gene: xrcc3 / 541414
• ZFINID: ZDB-GENE-050320-116
• Length: 352
• Species: Danio rerio
• Alignment Length: 359
• Identity: 97/359 - (27%)
• Similarity: 151/359 - (42%)
• Gaps: 53/359 - (14%)

  Fly    13 EEEEEGPLSVTKLIGGSI-TAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQIITEAN 76
            |:.|..|..:..:..|:. :||::..:....|..:..::.|..::|.          :.:.....
Zfish     4 EQLELNPRIIAAVKKGNFRSAKEVLCVSGPDLQRLTRLSKADVQRLH----------QAVAASVR 58

  Fly    77 KLVPLGFLSARTFYQMRADVVQ----LSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTL 137
            |..|   ::|....|....|::    ||.....||.|:.||:....|||:.||...||||.|..|
Zfish    59 KSKP---VTALQLIQGECPVLEPGHRLSFACPVLDGLMRGGLPLRGITELAGESAAGKTQFCLQL 120

  Fly   138 AVTCQLPISQKGGEGKCMYIDTENTFRPERL-AAIAQRYKL---------NESEVLDNVAFTRAH 192
            .::.|.|....|.....:||.||::|..:|| ..|.|:.:|         :.....||:....|.
Zfish   121 CLSVQYPQEHGGLNSGAVYICTEDSFPIKRLRQLITQQPRLRPDLPPALIHSLRFSDNIYIEHAA 185

  Fly   193 NSDQ-QTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEF 256
            :.:. |..:.|....:|......||:|||..||:||:: ...|...|..||..|...|.||:..:
Zfish   186 DLEALQVCVSQRVPVLLKRGLVRLLVVDSVAALFRSEF-QADEAVQRSRHLLAFSSTLHRLSHTY 249

  Fly   257 GVAVVITNQVTASLDGA-PGMFD----AKK--PIGGHIMAHSSTTRLYLRK----GKGETRIC-- 308
            ...|:..||||..:||. ||..|    ..|  |..|...|:....||.||:    .|.::|.|
Zfish   250 AAPVLCVNQVTDVVDGPNPGRCDYGLVGSKVLPALGIAWANQVMVRLMLRRLAGQVKSDSRSCAP 314

  Fly   309 ---KIYDSPCLPESEAMFAI-------LPDGIGD 332
               ::..:|.||.|..:..:       :|||..|
Zfish   315 RKLEVVFAPHLPRSSCLCGVWEEGVRGIPDGDSD 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	94/350 (27%)
		HHH_5	30..77	CDD:291205	5/47 (11%)
		Rad51_DMC1_radA	99..331	CDD:238543	82/265 (31%)
xrcc3	NP_001013559.1	Rad51	81..339	CDD:285604	79/258 (31%)
		Rad51_DMC1_radA	82..340	CDD:238543	79/258 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810