Protein Alignment spn-A and Rad51c

DIOPT Version :9

• Sequence 1: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: XP_038942551.1
• Gene: Rad51c / 497976
• RGDID: 1563765
• Length: 402
• Species: Rattus norvegicus
• Alignment Length: 340
• Identity: 89/340 - (26%)
• Similarity: 143/340 - (42%)
• Gaps: 75/340 - (22%)

  Fly    32 AKDIKLLQQASLHTVE----------------SVANATKKQLMAIPGLGGGKVEQIITEANKLVP 80
            :|::.:.::.:|.|::                ||||   |:..|:..|     ||..|:
  Rat    74 SKEVGISKEEALETLQILRRECLTNKPRCAGTSVAN---KKCTALELL-----EQEHTQ------ 124

  Fly    81 LGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPI 145
             ||               :.|....||.:|||||.....||:.|....||||||..|||..|:|.
  Rat   125 -GF---------------IITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPE 173

  Fly   146 SQKGGEGKCMYIDTENTFRPERLAAIA------------------QRYKLNE---SEVLDNVAFT 189
            ...|..|:.::||||.:|..:|:.::|                  |:..|.:   ..:|.::.:.
  Rat   174 CFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENILSHIYYF 238

  Fly   190 RAHNSDQQTKLIQMAAGMLFE-SRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLA 253
            |.|:..:....:.:....|.: |:..|:|:|.....:|.|.   .:|..|...|....:.|..||
  Rat   239 RCHDYTELLAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDL---DDLFLRTRLLNGLAQQLISLA 300

  Fly   254 DEFGVAVVITNQVTASLDGAPGMFDAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPE 318
            ::..:||::|||:|..:|....   :..|..|....|::|.||... .:.:.|...:|.||...|
  Rat   301 NKHRLAVILTNQMTTKIDKNQA---SLVPALGESWGHAATIRLIFH-WEQKQRFATLYKSPSQKE 361

  Fly   319 SEAMFAILPDGIGDA 333
            |...|.|.|.|..||
  Rat   362 STVPFQITPQGFRDA 376

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	89/340 (26%)
		HHH_5	30..77	CDD:291205	13/60 (22%)
		Rad51_DMC1_radA	99..331	CDD:238543	72/253 (28%)
Rad51c	XP_038942551.1	Sms	97..>166	CDD:223993	29/98 (30%)
		Rad51C	145..357	CDD:410900	56/218 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810