Protein Alignment spn-A and spn-B

DIOPT Version :9

• Sequence 1: NP_524583.1
• Gene: spn-A / 43577
• FlyBaseID: FBgn0003479
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_476740.1
• Gene: spn-B / 41746
• FlyBaseID: FBgn0003480
• Length: 341
• Species: Drosophila melanogaster
• Alignment Length: 337
• Identity: 94/337 - (27%)
• Similarity: 142/337 - (42%)
• Gaps: 67/337 - (19%)

  Fly    30 ITAKDIKLL--QQASLHT---------VESVANATKKQLMAIPGLGGGKVEQIITEANKLVPLGF 83
            :|...::.|  :|.||||         |..:.:|..|.|..:|
  Fly    28 LTTPKVRFLDTRQQSLHTIVRKCTPDDVRVLKDAAAKWLAEMP---------------------- 70

  Fly    84 LSARTFYQMRADV--VQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPIS 146
            .||.:.::...:|  .::|.|...||:..|||:.|..|||:.|....|||||...|::..||| .
  Fly    71 QSADSLFKPLVNVRWSRVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLP-R 134

  Fly   147 QKGGEGK-CMYIDTENTFRPERL----AAIAQRYKLNESEVLDNVAFTRAHNSDQQ--TKLIQMA 204
            :.||.|| ..||.||::|...||    .|..:|:...|...|.|: |...|...:.  ..:|...
  Fly   135 ELGGLGKGVAYICTESSFPARRLLQMSKACEKRHPEMELNFLGNI-FVENHIEAEPLLACVINRI 198

  Fly   205 AGMLFESRYALLIVDSAMALYR--SDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVT 267
            ..::.:....|:|:||..|::|  :||:      .|..|:......|...||::..|||..|||
  Fly   199 PRLMQQHGIGLIIIDSVAAIFRLYNDYL------ERARHMRRLADALLSYADKYNCAVVCVNQV- 256

  Fly   268 ASLDGAPGMFDAKKPIGGHIMAHSSTTRLYLRKGKGETRI---------CKIYDSPCLPESEAMF 323
            |:.||...:     |..|...||...|||.:.:...:.|:         .:|..||..|...|.|
  Fly   257 ATRDGQDEI-----PCLGLQWAHLGRTRLRVSRVPKQHRMGDQLITVRKLEILYSPETPNDFAEF 316

  Fly   324 AILPDGIGDARE 335
            .|..:|:.:..|
  Fly   317 LITAEGVVNVPE 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
spn-A	NP_524583.1	recomb_RAD51	22..335	CDD:274048	93/335 (28%)
		HHH_5	30..77	CDD:291205	12/57 (21%)
		Rad51_DMC1_radA	99..331	CDD:238543	78/249 (31%)
spn-B	NP_476740.1	Rad51	87..323	CDD:285604	77/249 (31%)
		Rad51_DMC1_radA	88..324	CDD:238543	78/249 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45445396
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0468
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.740